2013 PRIMES Conference
Third Annual PRIMES Conference, May 18-19, 2013
Saturday, May 18
Section I. Mathematics
9:00 am Welcoming Remarks
- Prof. Michael Sipser, Head of the MIT Mathematics Department
- Prof. Pavel Etingof, PRIMES Chief Research Advisor
- Dr. Slava Gerovitch, PRIMES Program Director
9:15 am Session 1
- Jonathan Tidor, Extremal functions of pattern avoidance in matrices (mentor Jesse Geneson) ( slides )
- Rohil Prasad, Investigating GCD in Euclidean domains (mentor Dr. Tanya Khovanova) ( slides )
- Kavish Gandhi and Noah Golowich, Inequalities and partition regularity of linear homogenous equations (mentor Laszlo Lovasz) ( slides )
10:35 am Session 2
- Jin-Woo Bryan Oh, Towards generalizing thrackles to arbitrary graphs (mentor Rik Sengupta) ( slides )
- Raj Raina, Minimum degrees of minimal Ramsey graphs (mentor Andrey Grinshpun) ( slides )
- Junho Won, Highly non-convex graph crossing sequences (mentor Chiheon Kim) ( slides )
11:50 am Session 3
- Leigh Marie Braswell, The Cookie Monster Problem (mentor Dr. Tanya Khovanova) ( slides )
- Saarik Kalia and Michael Zanger-Tishler, Good functions and multivariate polynomials (mentor Tue Ly, Brandeis University) ( slides )
2:00 pm Session 4
- Ying Gao, Depths of posets ordered by refinement (mentor Sergei Bernstein) ( slides )
- Vahid Fazel-Rezai, Equivalence classes of length-changing replacements of size-3 patterns (mentor Dr. Tanya Khovanova) ( slides )
- William Kuszmaul, On q -enumeration of modular statistics (mentor Darij Grinberg) ( slides )
3:15 pm Session 5
- Gabriella Studt, Higher Bruhat order on Weyl groups of Type B (mentor Daniel Thompson) ( slides )
- Ravi Jagadeesan, Belyi functions with prescribed monodromy (mentor Akhil Mathew) ( slides )
- Ritesh Ragavender, q -analogues of symmetric polynomials and nilHecke algebras (mentor Alex Ellis) ( slides )
4:30 pm Session 6
- Jeffrey Cai, Orbits of the symplectic group on partial flag varieties of type A (mentor Vinoth Nandakumar) ( slides )
- Isaac Xia, Quotients of lower central series over Z with multiple relations (mentor Dr. Yael Fregier) ( slides )
Sunday, May 20
Section II. Computer Science
9:00 am Welcoming Remarks
- Prof. Srini Devadas, Department of Electrical Engineering and Computer Science
- Dr. Slava Gerovitch, PRIMES Program Director
9:15 am Session 7
- Nicolaas Kaashoek and William Wu, How to teach a class to grade itself (mentors Christos Tzamos and Matt Weinberg) ( slides )
- Anish Athalye and Patrick Long, Performance analysis and optimization of skip lists for modern multi-core architectures (mentors Austin Clements and Stephen Tu) ( slides )
- Ajay Saini, Modeling the opinion dynamics of a social network (mentor Dr. Natasha Markuzon) ( slides )
10:40 am Session 8/h4>
-
Istvan Chung and Nathan Wolfe,
A collaborative editor in Ur/Web
(mentor Benjamin Barenblat) (
slides
)
-
Oron Propp and Alex Sekula,
Automating interactive theorem-proving with Coq and Ltac
(mentor Drew Haven) (
slides
)
-
Nihal Gowravaram,
Avoidance in (2+2)-free posets
(mentor Wuttisak Trongsiriwat) (
slides
)
12:05 pm Session 9
-
Steven Homberg,
Finding enrichments of functional annotations for
disease-associated single-nucleotide polymorphisms
(mentor Dr. Luke Ward) (
slides
)
-
John Long,
Evidence of purifying selection in humans
(mentor Angela Yen) (
slides
)
2:00 pm Session 10
-
Dr. Gil Alterovitz, Harvard-MIT Division of Health Sciences and
Technology, Introductory remarks
-
Ben Zheng,
Removing disorder in drug resistance-related proteins in
tuberculosis through hill-climbing algorithms
(mentor Dr. Gil Alterovitz) (
slides
)
-
Peijin Zhang,
Leveraging disordered-ordered interactions to yield new targets
and drugs for tuberculosis
(mentor Dr. Gil Alterovitz)
3:00 pm Session 11
-
Jonathan Patsenker,
Finding the binding sites of MoRFs on a partner protein
(mentor Dr. Gil Alterovitz) (
slides
)
-
Yishen Chen,
SMART Genomics API
(mentor Dr. Gil Alterovitz) (
slides
)
-
Skanda Koppula,
Prediction of disease by pathway-based integrative genomic and
demographic analysis
(mentor Dr. Gil Alterovitz and Dr. Amin Zollanvari) (
slides
)
Section III. Computational and Physical Biology
4:10 pm Session 12
-
Prof. Leonid Mirny, Division of Health Sciences and Technology and
Physics Department, Introductory remarks
-
Boryana Doyle,
Chromatin organization: from polymer loops to topological
domains
(mentors Geoffrey Fudenberg and Maxim Imakaev) (
slides
)
-
Carolyn Lu,
Dynamic folding of chromatin domains by active SMC-mediated
loops
(mentors Geoffrey Fudenberg and Maxim Imakaev) (
slides
)
-
Ashwin Murali,
Lineage-dependent properties of 16S ribosomal RNA nucleotide
composition
(mentors Geoffrey Fudenberg and Maxim Imakaev) (
slides
)
-
Hao Shen,
The impact of gene order on evolution
(mentor Anton Goloborodko) (
slides
)
Contact
With questions, contact PRIMES Program Director Slava Gerovitch at