Bioinformatics Seminar
The Bioinformatics Seminar is co-sponsored by the Department of Mathematics at the Massachusetts Institute of Technology and the Theory of Computation group at MIT's Computer Science and Artificial Intelligence Laboratory (CSAIL). The seminar series focuses on highlighting areas of research in the field of computational biology. This year, we are hoping to highlight three topics: (1) language models and their uses in biology and biomedicine, (2) ethical and societal issues in biomedical data (e.g. privacy, fairness), and (3) single-cell biology.
Spring 2006
| Date | Speaker | Title | Abstract |
|---|---|---|---|
| Feb. 13 | Joachim Theilhaber Aventis |
GECKO: a complete large-scale gene expression analysis platform | |
| Feb. 20 | Holiday (President's Day) | ||
| Feb. 27 | Paul de Bakker MGH-Molecular Biology |
Human Genome Variation and Risk to Common Disease | |
| Mar. 6 | William M. Gelbart Harvard |
The Comparative Analysis of Insect Genomes | |
| Mar.13 | Jacques Cohen Brandeis |
Towards a comprehensive view of computational approaches in systems biology | |
| Mar. 20 | Karen Sachs MIT |
Bayesian network models of biological signaling pathways | |
| Mar.27 | Julien Gagneur EMBL |
Molecular Networks Decomposition and the Computation of Elementary Modes | |
| Apr. 3 | Michael Zuker RPI |
Predicting nucleic acid hybridization and melting profiles. | |
| Apr. 10 | Amy Keating MIT |
Computational Strategies for Predicting and Designing Protein Structure and Interactions | |
| Apr. 17 | Holiday (Patriot's Day) | ||
| Apr. 14 | Manolis Kellis MIT |
Whole-genome comparative genomics in the fly. | |
| May 1 | Serafim Batzoglou Stanford |
Models and algorithms for genomic sequences, proteins, and networks of protein interactions. | |
| May 8 | Mona Singh Princeton |
Analyzing and interrogating protein interaction maps using network schemas | |
| May 15> | Jinbo Xu TTI |
A Parameterized Algorithm for Protein Structure Alignment | |
| May 22 | Pierre Nicodeme (CNRS) Laboratoire d'Informatique, LIX, Ecole Polytechnique, and Algorithms Group of INRIA-Rocquencourt Palaiseau (FRANCE) |
Asymptotic Average Profiles, from Tries to Suffix-trees |
Past Terms
A listing of the Bioinformatics Seminar series home pages from prior terms.
- Fall 2023 (Current)
- Fall 2022
- Spring 2022
- Fall 2021
- Spring 2021
- Spring 2020
- Spring 2019
- Spring 2018
- Spring 2017
- Spring 2016
- Spring 2015
- Spring 2013
- Spring 2011
- Spring 2010
- Spring 2009
- Fall 2008
- Fall 2007
- Spring 2007
- Fall 2006
- Spring 2006
- Fall 2005
- Spring 2005
- Fall 2004
- Spring 2004
- Fall 2003
- Spring 2003
- Spring 2001
Organizers and Information
The Bioinformatics Seminar is hosted by MIT Simons Professor of Mathematics and head of the Computation and Biology group at CSAIL Bonnie Berger. Professor Berger is also Faculty of Harvard-MIT Health Sciences & Technology, Associate Member of the Broad Institute of MIT and Harvard, Faculty of MIT CSB, and Affiliated Faculty of Harvard Medical School.
The seminar is announced weekly via email to members of the seminar's mailing list and to those on CSAIL's event calendar list. It is also posted in the BioWeek calendar.
Bonnie Berger: bab@mit.edu
Shuvom Sadhuka (TA): ssadhuka@mit.edu
To be added to the seminar's email announcement list or for any questions you have about the seminar, please mail bioinfo@csail.mit.edu.
If you plan to enroll in the associated course, 18.418/HST.504: Topics in Computational Molecular Biology, please contact Professor Berger (bab@mit.edu) and cc TA Shuvom Sadhuka (ssadhuka@mit.edu) for more information.