# papers.bib

@article{SoyarsJo94,
author = {W. M. Soyars and Steven G. Johnson},
title = {Simulating the {Tevatron} liquid {Helium} satellite refrigerators},
journal = {Advances in Cryogenic Engineering},
year = 1994,
volume = 39,
pages = {1231--1235},
doi = {10.1007/978-1-4615-2522-6_151},
abstract = {A computer program to simulate the Fermilab Tevatron liquid helium satellite refrigeration system has been developed. The simulator program takes advantage of the Macintosh platform upon which it was developed to produce a unique, easy to use Macintosh interface to facilitate ease of cycle design and modification. The user can drag icons representing refrigerator components around on the screen and piece them together to form a variety of liquid helium refrigeration cycle configurations. Extensive use of the icons, windows, and pull-down menus of the Macintosh interface allows the user to easily alter refrigeration component configurations and parameters. Calculation accuracy is retained by using existing helium property subroutines and component models. The user interface, program output, and code details are described. Sample configurations and results are presented.}
}

@article{MorrisonLe96,
pdf = {MorrisonLe96.pdf},
author = {Rick L. Morrison and Anthony L. Lentine and Steven G. Johnson and Wayne H. Knox},
title = {Design and demonstration of a high-speed, multichannel, optical-sampling oscilloscope},
journal = {Applied Optics},
year = 1996,
volume = 35,
pages = {1187--1194},
doi = {10.1364/AO.35.001187},
abstract = {Free-space digital optical systems have demonstrated the capability to provide thousands of optical
connections between optoelectronic chips. This dense concentration of channels creates substantial
challenges in monitoring individual connections for diagnostic purposes without compromising performance.
From the concept of stroboscopic techniques, we have designed and constructed a multichannel
optical diagnostic tool that operates analogously to an electronic-sampling oscilloscope. The tool is
economically constructed by the use of commercially available video cameras and video-enhanced
personal computers. An integrated software application operates the tool and displays multiplechannel
waveforms. We demonstrate the oscilloscope-sampling optical waveforms of a twodimensional
optoelectronic modulator array operating at data rates from 0.5 to 4 Gbits/s.}
}

@article{MorrisonJo96,
pdf = {MorrisonJo96.pdf},
author = {Rick L. Morrison and Steven G. Johnson and Anthony L. Lentine and Wayne H. Knox},
title = {Multichannel optical oscilloscope for sampling broadband free-space optoelectronic circuits  },
journal = {Proc. SPIE},
year = 1996,
volume = 2692,
pages = {158--163},
doi = {10.1117/12.235847},
abstract = {The advent of large-scale, free-space, optoelecironic
interconnections, as demonstrated in recent
system prototypes, requires new sampling methods to
reveal diagnostic information. Several factors contribute
to the difficulty of probing optical communications
channels without disrupting their operation. High-speed
electronic connections to the chip periphery are not
available in sufficient number and would contribute an
undesirable thermal load. Electronic and optical
physical contact probes would obscure many of the
optical channels that are relayed to a common surface of
the chip in current systems. Optical sampling provides
the better method although many standard techniques
are either too time consuming or complex to implement.
We will describe a tool we developed that delivers
diagnostic information on a large number of high-speed,
optical data channels simultaneously and operates
analogously to the conventional sampling electronic
oscilloscope. The optical oscilloscope is constructed
using CCD cameras and video capture boards that are
controlled by a software application resident in a
personal computer. Sampling is based on a stroboscopic
method of using short pulsed laser probe beam
synchronized to a data stream to illuminate optical
modulators within the opto-elecironic circuit. We have
demonstrated and will discuss the tool's capability of
simultaneously monitoring arrays of broadband optoelectronic
devices operating at speeds from several
hundred Megabit/s to a few Gigabit/s.}
}

@article{FrigoJo05,
pdf = {FrigoJo05.pdf},
author = {Frigo, Matteo and Johnson, Steven G.},
title = {The Design and Implementation of {FFTW3}},
journal = {Proceedings of the IEEE},
year = 2005,
month = {February},
volume = 93,
number = 2,
pages = {216--231},
doi = {10.1109/JPROC.2004.840301},
note = {Invited paper, special issue on Program Generation, Optimization, and Platform Adaptation''.},
abstract = {FFTW is an implementation of the discrete Fourier
transform (DFT) that adapts to the hardware in order to
maximize performance. This paper shows that such an approach
can yield an implementation that is competitive with handoptimized
libraries, and describes the software structure that
makes our current FFTW3 version flexible and adaptive. We
further discuss a new algorithm for real-data DFTs of prime size,
a new way of implementing DFTs by means of SIMDmachine-specific instructions, and how a special-purpose compiler can
derive optimized implementations of the discrete cosine and sine
transforms automatically from a DFT algorithm.}
}

@inproceedings{FrigoJo98,
pdf = {FrigoJo98.pdf},
author = {Frigo, Matteo and Johnson, Steven G.},
title = {{FFTW}: An adaptive software architecture for the {FFT}},
booktitle = {Proc. 1998 IEEE Intl. Conf. Acoustics Speech and Signal Processing},
pages = {1381--1384},
year = 1998,
volume = 3,
publisher = {IEEE},
doi = {10.1109/ICASSP.1998.681704},
abstract = {FFT literature has been mostly concerned with minimizing the
number of floating-point operations performed by an algorithm.
Unfortunately, on present-day microprocessors this measure is far
less important than it used to be, and interactions with the processor
pipeline and the memory hierarchy have a larger impact
on performance. Consequently, one must know the details of a
computer architecture in order to design a fast algorithm. In this
paper, we propose an adaptive FFT program that tunes the computation
automatically for any particular hardware. We compared
our program, called FFTW, with over 40 implementations of the
FFT on 7 machines. Our tests show that FFTW's self-optimizing
approach usually yields significantly better performance than all
other publicly available software. FFTW also compares favorably
with machine-specific, vendor-optimized libraries.}
}

@techreport{FrigoJo97,
pdf = {FrigoJo97.pdf},
author = {Frigo, Matteo and Johnson, Steven G.},
title = {The Fastest {Fourier} Transform in the {West}},
institution = {Massachusetts Institute of Technology},
year = 1997,
number = {MIT-LCS-TR-728},
month = {September},
abstract = {This paper describes FFTW, a portable C package for
computing the one- and multidimensional complex discrete Fourier
transform (DFT). FFTW is typically faster than all other publicly
available DFT software, including the well-known FFTPACK and the code
from Numerical Recipes. More interestingly, FFTW is competitive with
or better than proprietary, highly-tuned codes such as Sun's
Performance Library and IBM's ESSL library. FFTW implements the Cooley-Tukey
fast Fourier transform, and is freely available on the Web at
http://theory.lcs.mit/~fftw.  Three main ideas are the keys to s
performance. First, the computation of the transform is performed by
an executor consisting of highly-optimized, composable blocks of C
code called codelets. Second, at runtime, a planner finds an efficient
way (called ) to compose the codelets. Through the planner, FFTW adapts
itself to the architecture of the machine it is running on. Third, the
codelets are automatically generated by a codelet generator written in
the Caml Light dialect of ML. The codelet generator produces long,
optimized, unreadable code, which is nevertheless easy to modify via
simple changes to th generator.}
}

@article{JohnsonFr07,
pdf = {JohnsonFr07.pdf},
author = {Steven G. Johnson and Matteo Frigo},
title = {A modified split-radix {FFT} with fewer arithmetic operations},
journal = {IEEE Transactions on Signal Processing},
year = 2007,
month = {January},
volume = 55,
number = 1,
pages = {111--119},
doi = {10.1109/TSP.2006.882087},
abstract = {Recent results by Van Buskirk et al. have broken
the record set by Yavne in 1968 for the lowest exact count of
real additions and multiplications to compute a power-of-two
discrete Fourier transform (DFT). Here, we present a simple
recursive modification of the split-radix algorithm that computes
the DFT with asymptotically about 6\% fewer operations than
Yavne, matching the count achieved by Van Buskirk's program-generation
framework. We also discuss the application of our
algorithm to real-data and real-symmetric (discrete cosine) transforms,
where we are again able to achieve lower arithmetic counts
than previously published algorithms.}
}

@article{VilleneuveFa98,
pdf = {VilleneuveFa98.pdf},
author = {P. R. Villeneuve and S. Fan and S. G. Johnson and J. D. Joannopoulos},
title = {Three-dimensional photon confinement in photonic crystals of low-dimensional periodicity},
journal = {IEE Proceedings: Optoelectronics},
year = 1998,
volume = 145,
number = 6,
pages = {384--390},
doi = {10.1049/ip-opt:19982467},
abstract = {Photonic crystals of one- or two-dimensional
periodicity can be used to achieve
three-dimensional photon confinement in
dielectric waveguides with modal volumes of the
order of a cubic half-wavelength. Since photonic
crystals of low-dimensional periodicity do not
have full three-dimensional bandgaps, the
with decreasing modal volumes. High-$Q$ resonant
modes can be generated by reducing the strength
of the photon confinement. Increasingly, larger
more efficient coupling to waveguide modes
outside the cavity.}
}

@article{JohnsonMa98,
pdf = {JohnsonMa98.pdf},
author = {Steven G. Johnson and Christina Manolatou and Shanhui Fan and PierreR. Villeneuve and J. D. Joannopoulos and H. A. Haus},
title = {Elimination of cross talk in waveguide intersections},
journal = {Optics Letters},
year = 1998,
volume = 23,
number = 23,
pages = {1855--1857},
doi = {10.1364/OL.23.001855},
abstract = {We present general criteria for crossing perpendicular waveguides with nearly 100\% throughput and 0\% cross talk. Our design applies even when the waveguide width is of the order of the wavelength. The theoretical basis for this phenomenon is explained in terms of symmetry considerations and resonant tunneling and is then illustrated with numerical simulations for both a two-dimensional photonic crystal and a conventional high-index-contrast waveguide crossing. Cross-talk reduction by up to 8 orders of magnitude is achieved relative to unmodified crossings.}
}

@article{ManolatouJo99,
pdf = {ManolatouJo99.pdf},
author = {C. Manolatou and Steven G. Johnson and Shanhui Fan and Pierre R. Villeneuve and H. A. Haus and J. D. Joannopoulos},
title = {High-density integrated optics},
journal = {Journal of Lightwave Technology},
year = 1999,
volume = 17,
number = 9,
pages = {1682--1692},
doi = {10.1109/50.788575},
abstract = {This paper presents two-dimensional (2-D) finite
difference time domain (FDTD) simulations of low-loss rightangle
waveguide bends, T-junctions and crossings, based on high
index-contrast waveguides. Such structures are essential for the
dense integration of optical components. Excellent performance
characteristics are obtained by designing the waveguide intersection
regions as low-Q resonant cavities with certain symmetries
and small radiation loss. A simple analysis, based on coupled
mode theory in time, is used to explain the operation principles
and agrees qualitatively with the numerical results.}
}

@article{JohnsonFa99,
pdf = {JohnsonFa99.pdf},
author = {Steven G. Johnson and Shanhui Fan and Pierre R. Villeneuve and J. D. Joannopoulos and L. A. Kolodziejski},
title = {Guided modes in photonic crystal slabs},
journal = {Physical Review~B},
year = 1999,
volume = 60,
pages = {5751--5758},
doi = {10.1103/PhysRevB.60.5751},
abstract = {We analyze the properties of two-dimensionally periodic dielectric structures that have a band gap for propagation in a plane and that use index guiding to confine light in the third dimension. Such structures are more amenable to fabrication than photonic crystals with full three-dimensional band gaps, but retain or approximate many of the latter's desirable properties. We show how traditional band-structure analysis can be adapted to slab systems in the context of several representative structures, and describe the unique features that arise in this framework compared to ordinary photonic crystals.}
}

@article{LinCh00,
pdf = {LinCh00.pdf},
author = {S. Y. Lin and E. Chow and S. G. Johnson and J. D. Joannopoulos},
title = {Demonstration of highly efficient waveguiding in a photonic crystal slab at the 1.5-$\mu$m wavelength},
journal = {Optics Letters},
year = 2000,
volume = 25,
pages = {1297--1299},
doi = {10.1364/OL.25.001297},
abstract = {Highly efficient transmission of 1.5-$\mu$m light in a two-dimensional (2D) photonic crystal slab waveguide is experimentally demonstrated. Light waves are shown to be guided along a triple-line defect formed within a 2D crystal and vertically by a strong index-guiding mechanism. At certain wavelength ranges, complete transmission is observed, suggesting lossless guiding along this photonic one-dimensional conduction channel.}
}

@article{JohnsonVi00,
pdf = {JohnsonVi00.pdf},
author = {Steven G. Johnson and Pierre R. Villeneuve and Shanhui Fan and J. D. Joannopoulos},
title = {Linear waveguides in photonic-crystal slabs},
journal = {Physical Review~B},
year = 2000,
volume = 62,
pages = {8212--8222},
doi = {10.1103/PhysRevB.62.8212},
abstract = {Linear waveguides in photonic-crystal slabs, two-dimensionally periodic dielectric structures of finite height, are fundamentally different from waveguides in two-dimensional photonic crystals. The most important distinctions arise from the fact that photonic-crystal slab waveguides must be index-confined in the vertical direction (while a band gap confines them horizontally). We present a systematic analysis of different families of waveguides in photonic-crystal slabs, and illustrate the considerations that must be applied to achieve single-mode guided bands in these systems. In this way, the unusual features of photonic-crystal waveguides can be realized in three dimensions without the fabrication complexity required by photonic crystals with complete three-dimensional band gaps.}
}

@article{ChowLi00,
pdf = {ChowLi00.pdf},
author = {Edmond Chow and S. Y. Lin and S. G. Johnson and P. R. Villeneuve and J. D. Joannopoulos and J. R. Wendt and G. A. Vawter and W. Zubrzycki and H. Hou and A. Alleman},
title = {Three-dimensional control of light in a two-dimensional photonic crystal slab},
journal = {Nature},
year = 2000,
volume = 497,
pages = {983--986},
doi = {10.1038/35039583},
abstract = {Optoelectronic devices are increasingly important in communication and information technology. To achieve the necessary manipulation of light (which carries information in optoelectronic devices), considerable efforts are directed at the development of crystals photonicperiodic dielectric materials that have so-called photonic bandgaps, which prohibit the propagation of photons having energies within the bandgap region. Straightforward application of the bandgap concept is generally thought to require three-dimensional (3D) photonic crystals; their two-dimensional (2D) counterparts confine light in the crystal plane, but not in the perpendicular $z$ direction, which inevitably leads to diffraction losses. Nonetheless, 2D photonic crystals still attract interest because they are potentially more amenable to fabrication by existing techniques and diffraction losses need not seriously impair utility. Here we report the fabrication of a waveguide-coupled photonic crystal slab (essentially a free-standing 2D photonic crystal) with a strong 2D bandgap at wavelengths of about 1.5 $\mu$m, yet which is capable of fully controlling light in all three dimensions. These features confirm theoretical calculations on the possibility of achieving 3D light control using 2D bandgaps, with index guiding providing control in the third dimension, and raise the prospect of being able to realize unusual photonic-crystal devices, such as thresholdless lasers.}
}

@article{JohnsonJo00,
pdf = {JohnsonJo00.pdf},
author = {Steven G. Johnson and J. D. Joannopoulos},
title = {Three-dimensionally periodic dielectric layered structure with omnidirectional photonic band gap},
journal = {Applied Physics Letters},
year = 2000,
volume = 77,
pages = {3490--3492},
doi = {10.1063/1.1328369},
abstract = {A three-dimensionally periodic dielectric structure with a large complete photonic band gap (PBG) is presented. The structure is distinguished by a sequence of planar layers, identical except for a horizontal offset, and repeating every three layers to form an fcc lattice. The layers can be thought of as an alternating stack of the two basic two-dimensional (2D) PBG slab geometries: rods in air and air cylinders in dielectric. These high-symmetry planar cross-sections should simplify the integration of optical devices and components by allowing modification of only a single layer, using simple defects of the same form as in the corresponding 2D systems. A process for fabricating the structure with conventional planar microfabrication technology is described. Gaps of over 21\% are obtained for Si/air substrates. Reasonable gaps, over 8\%, can be achieved even for the moderate index ratio of 2.45 (Si/SiO$_2$).}
}

@article{JohnsonJo01,
pdf = {JohnsonJo01.pdf},
author = {Steven Johnson and John Joannopoulos},
title = {Block-iterative frequency-domain methods for {Maxwell}'s equations in a planewave basis},
journal = {Optics Express},
year = 2001,
volume = 8,
pages = {173--190},
url = {http://www.opticsinfobase.org/abstract.cfm?URI=oe-8-3-173},
doi = {10.1364/OE.8.000173},
abstract = {We describe a fully-vectorial, three-dimensional algorithm to compute the definite-frequency eigenstates of Maxwell's equations in arbitrary periodic dielectric structures, including systems with anisotropy (birefringence) or magnetic materials, using preconditioned block-iterative eigensolvers in a planewave basis. Favorable scaling with the system size and the number of computed bands is exhibited. We propose a new effective dielectric tensor for anisotropic structures, and demonstrate that $O(\Delta x^2)$ convergence can be achieved even in systems with sharp material discontinuities. We show how it is possible to solve for interior eigenvalues, such as localized defect modes, without computing the many underlying eigenstates. Preconditioned conjugate-gradient Rayleigh-quotient minimization is compared with the Davidson method for eigensolution, and a number of iteration variants and preconditioners are characterized. Our implementation is freely available on the Web.}
}

@article{JohnsonIb01,
pdf = {JohnsonIb01.pdf},
author = {Steven Johnson and Mihai Ibanescu and M. Skorobogatiy and Ori Weisberg and Torkel Engeness and Marin Solja{\v{c}}i{\'{c}} and Steven Jacobs and J. Joannopoulos and Yoel Fink},
title = {Low-loss asymptotically single-mode propagation in large-core {OmniGuide} fibers},
journal = {Optics Express},
year = 2001,
volume = 9,
pages = {748--779},
url = {http://www.opticsinfobase.org/abstract.cfm?URI=oe-9-13-748},
doi = {10.1364/OE.9.000748},
abstract = {We present the light-propagation characteristics of OmniGuide fibers, which guide light by concentric multi-layer dielectric mirrors having the property of omnidirectional reflection. We show how the lowest-loss TE$_{01}$ mode can propagate in a single-mode fashion through even large-core fibers, with other modes eliminated asymptotically by their higher losses and poor coupling, analogous to hollow metallic microwave waveguides. Dispersion, radiation leakage, material absorption, nonlinearities, bending, acircularity, and interface roughness are considered with the help of leaky modes and perturbation theory, and both numerical results and general scaling relations are presented. We show that cladding properties such as absorption and nonlinearity are suppressed by many orders of magnitude due to the strong confinement in a hollow core, and other imperfections are tolerable, promising that the properties of silica fibers may be surpassed even when nominally poor materials are employed.}
}

@article{ChowLi01,
pdf = {ChowLi01.pdf},
author = {Edmond Chow and S. Y. Lin and J. R. Wendt and S. G. Johnson and J. D. Joannopoulos},
title = {Quantitative analysis of bending efficiency in photonic-crystal waveguide bends at $\lambda = 1.55\mu$m wavelengths},
journal = {Optics Letters},
year = 2001,
volume = 26,
pages = {286--288},
doi = {10.1364/OL.26.000286},
abstract = {Based on a photonic-crystal slab structure, a 60 photonic-crystal waveguide bend is successfully fabricated. Its bending efficiency within the photonic bandgap is measured, and near 100\% efficiency is observed at certain frequencies near the valence band edge. The bending radius is $\sim 1\mu$m at a wavelength of $\lambda \sim 1.55\mu$m. The measured $\eta$ spectrum also agrees well with a finite-difference time-domain simulation.}
}

@article{LinCh01,
pdf = {LinCh01.pdf},
author = {S. Y. Lin and Edmond Chow and S. G. Johnson and J. D. Joannopoulos},
title = {Direct measurement of the quality factor in a two-dimensional photonic-crystal microcavity},
journal = {Optics Letters},
year = 2001,
volume = 26,
pages = {1903--1905},
doi = {10.1364/OL.26.001903},
abstract = {A new microcavity design is proposed and structures are realized with a two-dimensional photonic-crystal slab. The cavity consists of seven defect holes that encompass a hexagon and is designed to reduce vertical light leakage. From a direct transmission measurement, a $Q$ value of $816 \pm 30$ is achieved at $\lambda = 1.55\mu$m. This high-$Q$ cavity will permit the realistic realization of spontaneous-emission modification and on--off optical switches.}
}

@article{JohnsonFa01,
pdf = {JohnsonFa01.pdf},
author = {Steven G. Johnson and Shanhui Fan and Attila Mekis and J. D. Joannopoulos},
title = {Multipole-cancellation mechanism for high-{$Q$} cavities in the absence of a complete photonic band gap},
journal = {Applied Physics Letters},
year = 2001,
volume = 78,
pages = {3388--3390},
note = {Invited paper.},
doi = {10.1063/1.1375838},
abstract = {We describe and demonstrate a new mechanism for low radiation losses in structures lacking a complete band gap, and show how resonant cavities with $Q>10^3$ can be achieved without sacrificing strong localization in 3d. This involves a forced cancellation in the lowest-order term(s) of the multipole far-field radiation expansion. We focus on the system of photonic-crystal slabs, one- to two-dimensionally periodic dielectric structures of finite height with vertical index guiding. Simulations and analytical results in 2d and 3d are presented.}
}

@article{JohnsonMe01,
pdf = {JohnsonMe01.pdf},
author = {Steven G. Johnson and Attila Mekis and Shanhui Fan and John D. Joannopoulos},
title = {Molding the flow of light},
journal = {Computing in Science and Engineering},
year = 2001,
volume = 3,
number = 6,
pages = {38--47},
note = {Invited paper.},
doi = {10.1109/5992.963426},
abstract = {A new class of materials, called photonic crystals, affects a photon's properties in much the same way that a semiconductor affects an electron's properties. The ability to mold and guide light leads naturally to novel applications in several fields, including optoelectronics and telecommunications. The authors present an introductory survey of the basic concepts and ideas, including results for never before possible photon phenomena.}
}

@article{FanJo01,
pdf = {FanJo01.pdf},
author = {Shanhui Fan and S. G. Johnson and J. D. Joannopoulos and C. Manolatou and H. A. Haus},
title = {Waveguide branches in photonic crystals},
journal = {Journal of the Optical Society of America~B},
year = 2001,
volume = 18,
pages = {162--165},
doi = {10.1364/JOSAB.18.000162},
abstract = {Theoretical and numerical analyses of waveguide branches in a photonic crystal are presented. Conditions for perfect transmission and zero reflection are discussed. Based upon these conditions, numerical simulations of electromagnetic-wave propagation in photonic crystals are performed to identify structures with near-complete transmission.}
}

@article{PovinelliJo01,
pdf = {PovinelliJo01.pdf},
author = {M. L. Povinelli and Steven G. Johnson and Shanhui Fan and J. D. Joannopoulos},
title = {Emulation of two-dimensional photonic crystal defect modes in a photonic crystal with a three-dimensional photonic band gap },
journal = {Physical Review~B},
year = 2001,
volume = 64,
pages = 075313,
doi = {10.1103/PhysRevB.64.075313},
abstract = {Using numerical simulations, we demonstrate the construction of two-dimensional- (2D-) like defect modes in a recently proposed 3D photonic crystal structure. These modes, which are confined in all three dimensions by a complete photonic band gap, bear a striking similarity to those in 2D photonic crystals in terms of polarization, field profile, and projected band structures. It is expected that these results will greatly facilitate the observation of widely studied 2D photonic-crystal phenomena in a realistic, 3D physical system.}
}

@article{JohnsonPo01-SPIE,
pdf = {JohnsonPo01-SPIE.pdf},
author = {Steven G. Johnson and Michelle L. Povinelli and John D. Joannopoulos},
title = {New photonic crystal system for integrated optics},
journal = {Proc. SPIE},
year = 2001,
volume = 4532,
pages = {167--179},
note = {Invited paper.},
doi = {10.1117/12.436010},
abstract = {We describe a new photonic-crystal structure with a complete three-dimensional photonic band gap (PBG) and its potential
application to integrated optics. The structure not only has a large band gap and is amenable to layer-by-layer litho-fabrication,
but also introduces the feature of high-symmetry planar layers resembling two-dimensional photonic crystals. This feature
enables integrated optical devices to be constructed by modification of only a single layer, and supports waveguide and
resonant-cavity modes that strongly resemble the corresponding modes in the simpler and well-understood 2d systems. In
contrast to previous attempts to realize 2d crystals in 3d via finite-height slabs,'' however, the complete PBG of the new system
eliminates the possibility of radiation losses. Thus, it provides a robust infrastructure within which to embed complex
optical networks, combining elements such as compact filters, channel-drops, and waveguide bends/junctions that have previously
been proposed in 2d photonic crystals. }
}

@article{ChowLi01-SPIE,
pdf = {ChowLi01-SPIE.pdf},
author = {Edmond K. Chow and Shawn-Yu Lin and Steven G. Johnson and John D. Joannopoulos and James A. Bur and Pierre R. Villeneuve},
title = {Demonstration of high waveguide bending efficiency ($>90$\%) in a photonic-crystal slab at 1.5-$\mu$m wavelengths},
journal = {Proc. SPIE},
year = 2001,
volume = 4283,
pages = {453--461},
doi = {10.1117/12.432595},
abstract = {Using a two-dimensional (2D) photonic-crystal slab structure, we have demonstrated a strong 2D photonic band gap with the capability of fully controlling light in all three dimensions. Our demonstration confirms the predictions on the possibility of achieving 3D light control using 2D band gaps, with strong index guiding providing control in the third dimension, and raise the prospect of being able to realize novel photonic-crystal devices. Based on such slab structure with triangular lattice of holes, a 60-degree photonic-crystal waveguide bend is fabricated. The intrinsic bending efficiency ($\eta$) is measured within the photonic band gap. As high as 90\% bending efficency is observed at some frequencies.}
}

@article{LinCh02,
pdf = {LinCh02.pdf},
author = {S. Y. Lin and E. Chow and J. Bur and S. G. Johnson and J. D. Joannopoulos},
title = {Low-loss, wide-angle {Y} splitter at approximately $\sim 1.6 \mu$m wavelengths built with a two-dimensional photonic crystal},
journal = {Optics Letters},
year = 2002,
volume = 27,
pages = {1400--1402},
doi = {10.1364/OL.27.001400},
abstract = {We report a successful experimental realization of a photonic-crystal Ysplitter operating at $\lambda \sim 1.6\mu$m. Our device has a large splitting angle of $120^\circ$ and a miniature size of $\sim 3\mu\mathrm{m}\times 3\mu\mathrm{m}$. Furthermore, the Y-splitter loss is measured to be 0.5--1dB at $\lambda$ = 1640--1680~nm , making the Ysplitter promising for integrated photonic- circuit applications. These unique properties are attributed to the new guiding principle made possible by the photonic bandgap.}
}

@article{WattsJo02,
pdf = {WattsJo02.pdf},
author = {M. R. Watts and S. G. Johnson and H. A. Haus and J. D. Joannopoulos},
title = {Electromagnetic cavity with arbitrary {$Q$} and small modal volume without a complete photonic bandgap},
journal = {Optics Letters},
year = 2002,
volume = 27,
pages = {1785--1787},
month = {October},
doi = {10.1364/OL.27.001785},
abstract = {We show how an electromagnetic cavity with arbitrarily high $Q$ and small (bounded) modal volume can be formed in two or three dimensions with a proper choice of dielectric constants. Unlike in previous work, neither a complete photonic bandgap nor a trade-off in mode localization for $Q$ is required. Rather, scattering and radiation are prohibited by a perfect mode match of the TE-polarized modes in each subsection of a Bragg resonator. $Q$y values in excess of $10^5$ are demonstrated through finite-difference time-domain simulations of two- and three-dimensional structures with modal areas or volumes of the order of the wavelength squared or cubed.}
}

@article{LuoJo02,
pdf = {LuoJo02.pdf},
author = {Chiyan Luo and Steven G. Johnson and J. D. Joannopoulos},
title = {All-angle negative refraction without negative effective index },
journal = {Physical Review~B},
year = 2002,
volume = 65,
pages = 201104,
doi = {10.1103/PhysRevB.65.201104},
abstract = {We describe an all-angle negative refraction effect that does not employ a negative effective index of refraction and involves photonic crystals. A few simple criteria sufficient to achieve this behavior are presented. To illustrate this phenomenon, a microsuperlens is designed and numerically demonstrated.}
}

@article{JohnsonIb02,
pdf = {JohnsonIb02.pdf},
author = {Steven G. Johnson and M. Ibanescu and M. A. Skorobogatiy and O. Weisberg and J. D. Joannopoulos and Y. Fink},
title = {Perturbation theory for {Maxwell}'s equations with shifting material boundaries},
journal = {Physical Review~E},
year = 2002,
volume = 65,
pages = 066611,
doi = {10.1103/PhysRevE.65.066611},
abstract = {Perturbation theory permits the analytic study of small changes on known solutions, and is especially useful in electromagnetism for understanding weak interactions and imperfections. Standard perturbation-theory techniques, however, have difficulties when applied to Maxwell's equations for small shifts in dielectric interfaces (especially in high-index-contrast, three-dimensional systems) due to the discontinous field boundary conditions---in fact, the usual methods fail even to predict the lowest-order behavior. By considering a sharp boundary as a limit of anisotropically smoothed systems, we are able to derive a correct first-order perturbation theory and mode-coupling constants, involving only surface integrals of the unperturbed fields over the perturbed interface. In addition, we discuss further considerations that arise for higher-order perturbative methods in electromagnetism.}
}

@article{SoljacicIb02,
pdf = {SoljacicIb02.pdf},
author = {Marin Solja{\v{c}}i{\'{c}} and Mihai Ibanescu and Steven G. Johnson and Yoel Fink and J. D. Joannopoulos},
title = {Optimal bistable switching in nonlinear photonic crystals},
journal = {Physical Review~E},
year = 2002,
volume = 66,
pages = 055601,
doi = {10.1103/PhysRevE.66.055601},
abstract = {We present an analytical model and numerical experiments to describe optimal bistable switching in a nonlinear photonic crystal system. It is proved that only three parameters are needed to characterize a bistable switch: the resonant frequency $\omega_\mathrm{res}$, the quality factor $Q$, and parameter $\kappa$ that measures nonlinear feedback strength.'' A photonic crystal enables the device to operate in single-mode fashion, as if it were effectively one dimensional. This provides optimal control over the input and output and facilitates further large-scale optical integration.}
}

@article{JohnsonBi02,
pdf = {JohnsonBi02.pdf},
author = {Steven G. Johnson and Peter Bienstman and M. A. Skorobogatiy and Mihai Ibanescu and Elefterios Lidorikis and J. D. Joannopoulos},
title = {Adiabatic theorem and continuous coupled-mode theory for efficient taper transitions in photonic crystals},
journal = {Physical Review~E},
year = 2002,
volume = 66,
pages = 066608,
doi = {10.1103/PhysRevE.66.066608},
abstract = {We prove that an adiabatic theorem generally holds for slow tapers in photonic crystals and other strongly grated waveguides with arbitrary index modulation, exactly as in conventional waveguides. This provides a guaranteed pathway to efficient and broad-bandwidth couplers with, e.g., uniform waveguides. We show that adiabatic transmission can only occur, however, if the operating mode is propagating (nonevanescent) and guided at every point in the taper. Moreover, we demonstrate how straightforward taper designs in photonic crystals can violate these conditions, but that adiabaticity is restored by simple design principles involving only the independent band structures of the intermediate gratings. For these and other analyses, we develop a generalization of the standard coupled-mode theory to handle arbitrary nonuniform gratings via an instantaneous Bloch-mode basis, yielding a continuous set of differential equations for the basis coefficients. We show how one can thereby compute semianalytical reflection and transmission through crystal tapers of almost any length, using only a single pair of modes in the unit cells of uniform gratings. Unlike other numerical methods, our technique becomes more accurate as the taper becomes more gradual, with no significant increase in the computation time or memory. We also include numerical examples comparing to a well-established scattering-matrix method in two dimensions.}
}

@article{LuoJo02-3d,
pdf = {LuoJo02-3d.pdf},
author = {Chiyan Luo and Steven G. Johnson and J. D. Joannopoulos},
title = {All-angle negative refraction in a three-dimensionally periodic photonic crystal},
journal = {Applied Physics Letters},
year = 2002,
volume = 81,
pages = {2352--2354},
doi = {10.1063/1.1508807},
abstract = {We introduce a photonic crystal that has a large range of effective negative refractive index in three dimensions (3D) and demonstrate its negative-refraction property by numerical simulations. With slight modifications, our design is also amenable to layer-by-layer fabrication. This work should enable experimental observation of negative refraction and related phenomena in 3D at optical frequencies.}
}

@article{SkorobogatiyJa02,
pdf = {SkorobogatiyJa02.pdf},
author = {Maksim Skorobogatiy and Steven Jacobs and Steven Johnson and Yoel Fink},
title = {Geometric variations in high index-contrast waveguides, coupled mode theory in curvilinear coordinates},
journal = {Optics Express},
year = 2002,
volume = 10,
pages = {1227--1243},
url = {http://www.opticsinfobase.org/abstract.cfm?URI=oe-10-21-1227},
doi = {10.1364/OE.10.001227},
abstract = {Perturbation theory formulation of Maxwell's equations gives a theoretically elegant and computationally efficient way of describing small imperfections and weak interactions in electro-magnetic systems. It is generally appreciated that due to the discontinuous field boundary conditions in the systems employing high dielectric contrast profiles standard perturbation formulations fail when applied to the problem of shifted material boundaries. In this paper we developed a novel coupled mode and perturbation theory formulations for treating generic non-uniform (varying along the direction of propagation) perturbations of a waveguide cross-section based on Hamiltonian formulation of Maxwell equations in curvilinear coordinates. We show that our formulation is accurate and rapidly converges to an exact result when used in a coupled mode theory framework even for the high index-contrast discontinuous dielectric profiles. Among others, our formulation allows for an efficient numerical evaluation of induced PMD due to a generic distortion of a waveguide profile, analysis of mode filters, mode converters and other optical elements such as strong Bragg gratings, tapers, bends etc., and arbitrary combinations of thereof. To our knowledge, this is the first time perturbation and coupled mode theories are developed to deal with arbitrary non-uniform profile variations in high index-contrast waveguides.}
}

@article{SoljacicJo02,
pdf = {SoljacicJo02.pdf},
author = {Marin Solja{\v{c}}i{\'{c}} and Steven G. Johnson and Shanhui Fan and Mihai Ibanescu and Erich Ippen and J. D. Joannopoulos},
title = {Photonic-crystal slow-light enhancement of nonlinear phase sensitivity},
journal = {Journal of the Optical Society of America~B},
year = 2002,
volume = 19,
pages = {2052--2059},
doi = {10.1364/JOSAB.19.002052},
abstract = {We demonstrate how slow group velocities of light, which are readily achievable in photonic-crystal systems, can dramatically increase the induced phase shifts caused by small changes in the index of refraction. Such increased phase sensitivity may be used to decrease the sizes of many devices, including switches, routers, all-optical logical gates, wavelength converters, and others. At the same time a low group velocity greatly decreases the power requirements needed to operate these devices. We show how these advantages can be used to design switches smaller than $20\mu\mathrm{m} \times 200\mu\mathrm{m}$ in size by using readily available materials and at modest levels of power. With this approach, one could have $\sim 10^5$ such devices on a surface that is $2 \mathrm{cm} \times 2 \mathrm{cm}$, making it an important step towards large-scale all-optical integration.}
}

@article{SkorobogatiyIb02,
pdf = {SkorobogatiyIb02.pdf},
author = {Maksim Skorobogatiy and Mihai Ibanescu and Steven G. Johnson and Ori Weisberg and Torkel D. Engeness and Marin Solja{\v{c}}i{\'{c}} and Steven A. Jacobs and Yoel Fink},
title = {Analysis of general geometric scaling perturbations in a transmitting waveguide: Fundamental connection between polarization-mode dispersion and group-velocity dispersion},
journal = {Journal of the Optical Society of America~B},
year = 2002,
volume = 19,
pages = {2867--2875},
doi = {10.1364/JOSAB.19.002867},
abstract = {We develop a novel perturbation theory formulation to evaluate polarization-mode dispersion (PMD) for a general class of scaling perturbations of a waveguide profile based on generalized Hermitian Hamiltonian formulation of Maxwell's equations. Such perturbations include elipticity and uniform scaling of a fiber cross section, as well as changes in the horizontal or vertical sizes of a planar waveguide. Our theory is valid even for discontinuous high-index contrast variations of the refractive index across a waveguide cross section. We establish that, if at some frequencies a particular mode behaves like pure TE or TM polarized mode (polarization is judged by the relative amounts of the electric and magnetic longitudinal energies in the waveguide cross section), then at such frequencies for fibers under elliptical deformation its PMD as defined by an intermode dispersion parameter $\tau$ becomes proportional to group-velocity dispersion $D$ such that $\tau = \lambda \delta |D|$, where $\delta$ is a measure of the fiber elipticity and $\lambda$ is a wavelength of operation. As an example, we investigate a relation between PMD and group-velocity dispersion of a multiple-core step-index fiber as a function of the coreclad index contrast. We establish that in this case the positions of the maximum PMD and maximum absolute value of group-velocity dispersion are strongly correlated, with the ratio of PMD to group-velocity dispersion being proportional to the coreclad dielectric contrast.}
}

@article{JohnsonIb02-SPIE,
pdf = {JohnsonIb02-SPIE.pdf},
author = {Steven G. Johnson and Mihai Ibanescu and Maksim A. Skorobogatiy and Ori Weisberg and Torkel D. Engeness and Marin Solja{\v{c}}i{\'{c}} and Steven A. Jacobs and John D. Joannopoulos and Yoel Fink},
title = {Breaking the glass ceiling: Hollow {OmniGuide} fibers},
journal = {Proc. SPIE},
year = 2002,
volume = 4655,
pages = {1--15},
doi = {10.1117/12.463884},
abstract = {We argue that OmniGuide fibers, which guide light within
a hollow core by concentric multilayer films having the property of
omnidirectional reflection, have the potential to lift several
physical limitations of silica fibers.  We show how the strong
confinement in OmniGuide fibers greatly suppresses the properties of
the cladding materials: even if highly lossy and nonlinear materials
are employed, both the intrinsic losses and nonlinearities of silica
fibers can be surpassed by orders of magnitude. This feat, impossible
to duplicate in an index-guided fiber with existing materials, would
open up new regimes for long-distance propagation and dense
wavelengthdivision multiplexing (DWDM). The OmniGuide-fiber modes bear
a strong analogy to those of hollow metallic waveguides; from this
analogy, we are able to derive several general scaling laws with core
radius. Moreover, there is strong loss discrimination between guided
modes, depending upon their degree of confinement in the hollow core:
this allows large, ostensibly multi-mode cores to be used, with the
lowest-loss TE$_{01}$ mode propagating in an effectively single-mode
fashion. Finally, because this TE$_{01}$ mode is a cylindrically
symmetrical (azimuthally'' polarized) singlet state, it is immune to
polarization-mode dispersion (PMD), unlike the doubly-degenerate
linearly-polarized modes in silica fibers that are vulnerable to
birefringence.}
}

@article{SoljacicJo02-SPIE,
pdf = {SoljacicJo02-SPIE.pdf},
author = {Marin Solja{\v{c}}i{\'{c}} and Steven G. Johnson and Shanhui Fan and Mihai Ibanescu and Erich P. Ippen and John D. Joannopoulos},
title = {Enhancement of phase sensitivity by exploring slow light in photonic crystals},
journal = {Proc. SPIE},
year = 2002,
volume = 4870,
pages = {248--258},
doi = {10.1117/12.475541},
abstract = {We demonstrate how dramatic increases in the induced
phase shifts caused by small changes in the index of refraction can be
achieved by using very slow group velocities of light, which are
readily achievable in photonic crystal systems. Combined with the fact
that small group velocity greatly decreases the power requirements
needed to operate a device, enhanced phase sensitivity may be used to
decrease the size and power requirements of many devices, including
switches, routers, all-optical logical gates, wavelength converters,
etc. We demonstrate how these advantages can be used to design
switches smaller than 20*200 square microns in size, using readily
available materials, and at modest levels of power. With this
approach, one could have $\sim 10^5$ such devices on a surface 2*2
square cm, making it an important step towards large-scale all-optical
integration.}
}

@article{ChowLi02-SPIE,
pdf = {ChowLi02-SPIE.pdf},
author = {Edmond K. Chow and Shawn-Yu Lin and Steven G. Johnson and John D. Joannopoulos},
title = {Transmission measurement of quality factor in two-dimensional photonic-crystal microcavity},
journal = {Proc. SPIE},
year = 2002,
volume = 4646,
pages = {199--204},
doi = {10.1117/12.470516},
abstract = {A new micro-cavity design is proposed and structures are
realized using a 2D photonic-crystal slab. The cavity consists of
seven defect holes that encompass a hexagon and is designed to reduce
vertical light leakage. From a direct transmission measurement, a
$Q$-value of $816 \pm 30$ is achieved at $\lambda=1.55\mu$m. This
high-$Q$ cavity will enable realistic realization of spontaneous
emission modification and on-off optical switches.}
}

@article{LuoIb03,
pdf = {LuoIb03.pdf},
author = {Chiyan Luo and Mihai Ibanescu and Steven G. Johnson and J. D. Joannopoulos},
title = {Cerenkov Radiation in Photonic Crystals},
journal = {Science},
year = 2003,
volume = 299,
pages = {368--371},
doi = {10.1126/science.1079549},
abstract = {In a conventional material, the coherent Cerenkov radiation due to a moving charged particle is associated with a velocity threshold, a forward-pointing radiation cone, and a forward direction of emission. We describe different behavior for the Cerenkov radiation in a photonic crystal. In particular, this radiation is intrinsically coupled with transition radiation and is observable without any threshold. Within one particle-velocity range, we found a radiation pattern with a backward-pointing radiation cone. In another velocity range, backward-propagating Cerenkov radiation can be expected. Potential applications include velocity-sensitive particle detection and radiation generation at selectable frequencies.}
}

@article{SoljacicIb03,
pdf = {SoljacicIb03.pdf},
author = {Marin Solja{\v{c}}i{\'{c}} and Mihai Ibanescu and Steven G. Johnson and J. D. Joannopoulos and Yoel Fink},
title = {Optical bistability in axially modulated {OmniGuide} fibers},
journal = {Optics Letters},
year = 2003,
volume = 28,
pages = {516--518},
doi = {10.1364/OL.28.000516},
abstract = {We demonstrate the feasibility of optical bistability in an axially modulated nonlinear OmniGuide fiber through analytical theory and detailed numerical experiments. At 1.55-$\mu$m carrier wavelength, the in-fiber devices that we propose can operate with only a few tens of milliwatts of power, can have a nearly instantaneous response and recovery time, and can be shorter than 100 $\mu$m.}
}

@article{LuoJo03,
pdf = {LuoJo03.pdf},
author = {Chiyan Luo and Steven Johnson and J. Joannopoulos and J. Pendry},
title = {Negative refraction without negative index in metallic photonic crystals},
journal = {Optics Express},
year = 2003,
volume = 11,
pages = {746--754},
url = {http://www.opticsinfobase.org/abstract.cfm?URI=oe-11-7-746},
doi = {10.1364/OE.11.000746},
abstract = {It is shown that certain metallic photonic crystals can enable negative refraction and subwavelength imaging without relying on a negative effective index. These metallic structures are very simple in design and appear straightforward for fabrication. Their unusual electromagnetic response should provide an interesting comparison with the metallic left-handed materials.}
}

@article{EngenessIb03,
pdf = {EngenessIb03.pdf},
author = {Torkel Engeness and Mihai Ibanescu and Steven Johnson and Ori Weisberg and Maksim Skorobogatiy and Steven Jacobs and Yoel Fink},
title = {Dispersion tailoring and compensation by modal interactions in {OmniGuide} fibers},
journal = {Optics Express},
year = 2003,
volume = 11,
pages = {1175--1196},
url = {http://www.opticsinfobase.org/abstract.cfm?URI=oe-11-10-1175},
doi = {10.1364/OE.11.001175},
abstract = {We present a method for dispersion-tailoring of OmniGuide and other photonic band-gap guided fibers based on weak interactions (anticrossings'') between the core-guided mode and a mode localized in an intentionally introduced defect of the crystal. Because the core mode can be guided in air and the defect mode in a much higher-index material, we are able to obtain dispersion parameters in excess of 500,000 ps/nm-km. Furthermore, because the dispersion is controlled entirely by geometric parameters and not by material dispersion, it is easily tunable by structural choices and fiber-drawing speed. So, for example, we demonstrate how the large dispersion can be made to coincide with a dispersion slope that matches commercial silica fibers to better than 1\%, promising efficient compensation. Other parameters are shown to yield dispersion-free transmission in a hollow OmniGuide fiber that also maintains low losses and negligible nonlinearities, with a nondegenerate TE$_{01}$ mode immune to polarization-mode dispersion (PMD). We present theoretical calculations for a chalcogenide-based material system that has recently been experimentally drawn.}
}

@article{SkorobogatiyAn03,
pdf = {SkorobogatiyAn03.pdf},
author = {M. Skorobogatiy and C. Anastassiou and Steven Johnson and O. Weisberg and Torkel Engeness and Steven Jacobs and Rokan Ahmad and Yoel Fink },
title = {Quantitative characterization of higher-order mode converters in weakly multimoded fibers},
journal = {Optics Express},
year = 2003,
volume = 11,
pages = {2838--2847},
url = {http://www.opticsinfobase.org/abstract.cfm?URI=oe-11-22-2838},
doi = {10.1364/OE.11.002838},
abstract = {We present a rigorous analysis methodology of fundamental to higher order mode converters in step index few mode optical fibers. We demonstrate experimental conversion from a fundamental LP$_{01}$ mode to the higher order LP$_{11}$ mode utilizing a multiple mechanical bend mode converter. We perform a quantitative analysis of the measured light intensity, and demonstrate a modal decomposition algorithm to characterize the modal content excited in the fiber. Theoretical modelling of the current mode converter is then performed and compared with experimental findings.}
}

@article{IbanescuJo03,
pdf = {IbanescuJo03.pdf},
author = {Mihai Ibanescu and Steven G. Johnson and Marin Solja{\v{c}}i{\'{c}} and J. D. Joannopoulos and Yoel Fink and Ori Weisberg and Torkel D. Engeness and Steven A. Jacobs and M. Skorobogatiy},
title = {Analysis of mode structure in hollow dielectric waveguide fibers },
journal = {Physical Review~E},
year = 2003,
volume = 67,
pages = 046608,
doi = {10.1103/PhysRevE.67.046608},
abstract = {In this paper, we analyze the electromagnetic mode structure of an OmniGuide fiber---hollow dielectric waveguide in which light is confined by a large index-contrast omnidirectional dielectric mirror. In particular, we find that the modes in an OmniGuide fiber are similar to those in a hollow metallic waveguide in their symmetries, cutoff frequencies, and dispersion relations. We show that the differences can be predicted by a model based on a single parameter---the phase shift upon reflection from the dielectric mirror. The analogy to the metal waveguide extends to the transmission properties, resulting in the identification of the TE$_{01}$ mode as the lowest-loss mode of the OmniGuide fiber.}
}

@article{LidorikisPo03,
pdf = {LidorikisPo03.pdf},
author = {E. Lidorikis and M. L. Povinelli and S. G. Johnson and J. D. Joannopoulos},
title = {Polarization-independent linear waveguides in 3d photonic crystals},
journal = {Physical Review Letters},
year = 2003,
volume = 91,
pages = 023902,
doi = {10.1103/PhysRevLett.91.023902},
abstract = {Using a symmetry-based approach, we have designed polarization-independent waveguides in a 3D photonic crystal. A comprehensive series of numerical experiments, involving the propagation of pulsed signals through long straight waveguide sections and sharp bends, quantitatively evaluates the bend-transmission coefficient over the entire bandwidth of the corresponding guided modes. High ($\sim 95\%$) polarization-independent bend transmission is achieved within a certain frequency range.}
}

@article{LuoJo03-subwavelength,
pdf = {LuoJo03-subwavelength.pdf},
author = {Chiyan Luo and Steven G. Johnson and J. D. Joannopoulos},
title = {Subwavelength imaging in photonic crystals},
journal = {Physical Review~B},
year = 2003,
volume = 68,
pages = 045115,
doi = {10.1103/PhysRevB.68.045115},
abstract = {We investigate the transmission of evanescent waves through a slab of photonic crystal and explore the recently suggested possibility of focusing light with subwavelength resolution. The amplification of near-field waves is shown to rely on resonant coupling mechanisms to surface photon bound states, and the negative refractive index is only one way of realizing this effect. It is found that the periodicity of the photonic crystal imposes an upper cutoff to the transverse wave vector of evanescent waves that can be amplified, and thus a photonic-crystal superlens is free of divergences even in the lossless case. A detailed numerical study of the optical image of such a superlens in two dimensions reveals a subtle and very important interplay between propagating waves and evanescent waves on the final image formation. Particular features that arise due to the presence of near-field light are discussed.}
}

@article{PovinelliBr03,
pdf = {PovinelliBr03.pdf},
author = {Povinelli, M. L. and  Bryant, R. E. and Assefa, S. and Johnson, S. G. and Shanhui Fan and Erchak, A. A. and Petrich, G. S. and Lidorikis, E. and Joannopoulos, J. D. and Kolodziejski, L. A. and Ippen, E. P.},
title = { Design of a nanoelectromechanical high-index-contrast guided-wave optical switch for single-mode operation at 1.55 $\mu$m},
journal = {IEEE Photonics Technology Letters},
year = 2003,
volume = 15,
number = 9,
pages = {1207--1209},
doi = {10.1109/LPT.2003.816706},
abstract = {A design is presented for a nanoelectromechanical optical switch based on the horizontal deflection of an input waveguide to align with one of two output waveguides. The use of high-index (GaAs) strip waveguides surrounded by air, designed to be single-mode at 1.55 $\mu$m, significantly decreases device dimensions as compared to previous designs. Design tradeoffs between optical and mechanical properties of the device are discussed. By means of three-dimensional numerical simulations, optical transmission is optimized for two different design strategies: butt and parallel coupling. High polarization-independent transmission (over 90\%) is predicted for realistic design parameters.}
}

@article{JohnsonJo03,
pdf = {JohnsonJo03.pdf},
author = {Steven G. Johnson and J. D. Joannopoulos},
title = {Designing synthetic optical media: Photonic crystals},
journal = {Acta Materialia},
year = 2003,
volume = 51,
pages = {5823--5835},
doi = {10.1016/S1359-6454(03)00464-6},
abstract = {A new class of materials, called photonic crystals, affect a photon's properties in much the same way that a semiconductor affects an electron's properties. This represents an ability to mold and guide light that leads naturally to novel applications in several fields, including optoelectronics and telecommunications. We present an introductory survey of the basic concepts and ideas that underlie photonic crystals, and present results and devices that illustrate their potential to circumvent limits of traditional optical systems.}
}

@article{LidorikisPo03-SPIE,
pdf = {LidorikisPo03-SPIE.pdf},
author = {Elefterios Lidorikis and Michelle L. Povinelli and Steven G. Johnson and Marin Solja{\v{c}}i{\'{c}} and Mihai Ibanescu and Yoel Fink and John D. Joannopoulos},
title = {Modeling of nanophotonics},
journal = {Proc. SPIE},
year = 2003,
volume = 5225,
pages = {7--19},
note = {Invited paper.},
doi = {10.1117/12.508295},
abstract = {The ability of photonic crystals to mold the flow of
light in new ways can lead to a variety of novel and improved designs
of optical nanocomponents and nanodevices in photonics. Two examples
will be presented: a) Using linear materials, a polarization
independent waveguide is designed in a 3D photonic crystal. It is
demonstrated that this system provides lossless guiding of light at
length-scales approaching the wavelength of the light itself, offering
a promising platform for the design of integrated high performance
polarization-insensitive waveguide networks. b) Using nonlinear
materials, a cylindrical photonic crystal fiber is designed that can
exhibit all-optical switching without the need for an axial
periodicity. It is shown that this property stems from the unique
structure of the cylindrical photonic crystal guidedmode dispersion
relation, and can lead to significant improvements in manufacturing
ease, operating power usage, and device size requirements, making such
a system ideal for integrated all-optical signal processing.}
}

@article{SoljacicIb03-SPIE,
pdf = {SoljacicIb03-SPIE.pdf},
author = {Marin Solja{\v{c}}i{\'{c}} and Mihai Ibanescu and Chiyan Luo and Steven G. Johnson and Shanhui Fan and Yoel Fink and John D. Joannopoulos},
title = {All-optical switching using optical bistability in nonlinear photonic crystals},
journal = {Proc. SPIE},
year = 2003,
volume = 5000,
pages = {200--214},
note = {Invited paper.},
doi = {10.1117/12.480058},
abstract = {We demonstrate optical bistability in a class of non-linear photonic crystal devices, through
the use of detailed numerical experiments, and analytical theory. Our devices are shorter
than the wavelength of light in length, they can operate with only a few mW of power, and
can be faster than 1ps.}
}

@article{SkorobogatiyJo03,
pdf = {SkorobogatiyJo03.pdf},
author = {M. Skorobogatiy and Steven G. Johnson and Steven A. Jacobs and Yoel Fink},
title = {Dielectric profile variations in high-index-contrast waveguides, coupled mode theory, and perturbation expansions},
journal = {Physical Review~E},
year = 2003,
volume = 67,
pages = 046613,
doi = {10.1103/PhysRevE.67.046613},
abstract = {Perturbation theory formulation of Maxwell's equations gives a theoretically elegant and computationally efficient way of describing small imperfections and weak interactions in electromagnetic systems. It is generally appreciated that due to the discontinuous field boundary conditions in the systems employing high dielectric contrast profiles standard perturbation formulations fails when applied to the problem of shifted material boundaries. In this paper we developed coupled mode and perturbation theory formulations for treating generic perturbations of a waveguide cross section based on Hamiltonian formulation of Maxwell equations in curvilinear coordinates. We show that our formulation is accurate beyond the first order and rapidly converges to an exact result when used in a coupled mode theory framework even for the high-index-contrast discontinuous dielectric profiles. Among others, our formulation allows for an efficient numerical evaluation of such quantities as deterministic PMD and change in the GV and GVD of a mode due to generic profile distortion in a waveguide of arbitrary cross section. To our knowledge, this is the first time perturbation and coupled mode theories are developed to deal with arbitrary profile variations in high-index-contrast waveguides.}
}

@article{PovinelliJo03,
pdf = {PovinelliJo03.pdf},
author = {M. L. Povinelli and Steven G. Johnson and J. D. Joannopoulos and J. B. Pendry},
title = {Toward photonic-crystal metamaterials: Creating magnetic emitters in photonic crystals},
journal = {Applied Physics Letters},
year = 2003,
volume = 82,
pages = {1069--1071},
doi = {10.1063/1.1544428},
abstract = {In this work, we explore the possibility of designing
photonic crystals to act as magnetic metamaterials: structures that
exhibit magnetic properties despite the nonmagnetic character of their
constituents. The building blocks of a magnetic material are
microscopic magnetic dipoles, and to create a synthetic analog we
employ point-defect modes in a photonic crystal. We begin by
identifying a point defect mode in a three-dimensional crystal whose
local field pattern resembles an oscillating magnetic moment. By
analyzing the far-field pattern of the field radiated from the defect,
we prove quantitatively that such modes can be designed with a
primarily magnetic character: over 98\% of the emitted power goes into
magnetic multipole radiation. Unlike the constituents of natural para-
and ferromagnetic materials, these synthetic magnetic emitters can be
designed to operate without losses even at optical frequencies.}
}

@article{BienstmanAs03,
pdf = {BienstmanAs03.pdf},
author = {Peter Bienstman and Solomon Assefa and Steven G. Johnson and John D. Joannopoulos and Gale S. Petrich and Leslie A. Kolodziejski },
title = {Taper structures for coupling into photonic crystal slab waveguides},
journal = {Journal of the Optical Society of America~B},
year = 2003,
volume = 20,
pages = {1817--1821},
doi = {10.1364/JOSAB.20.001817},
abstract = {We present an adiabatic taper design in three dimensions for coupling light into photonic crystal defect waveguides in a square lattice of circular dielectric rods. The taper is a two-stage structure in which the first stage makes the transition from a dielectric waveguide to a coupled-cavity waveguide. The second stage subsequently transforms the waveguide mode from an index-guided mode to a band-gap-guided mode. We discuss differences between the two-dimensional device and its three-dimensional slab version.}
}

@inproceedings{JohnsonPo03-ESPC,
pdf = {JohnsonPo03-ESPC.pdf},
author = {Steven G. Johnson and M. L. Povinelli and P. Bienstman and M. Skorobogatiy and Solja{\v{c}}i{\'{c}}, Marin and M. Ibanescu and E. Lidorikis and J. D. Joannopoulos},
title = {Coupling, scattering and perturbation theory: Semi-analytical analyses of photonic-crystal waveguides},
booktitle = {Proc. 2003 5th Intl. Conf. on Transparent Optical Networks and 2nd European Symp. on Photonic Crystals},
pages = {103--109},
year = 2003,
volume = 1,
doi = {10.1109/ICTON.2003.1264589},
abstract = {Although brute-force simulations of Maxwell's equations,
such as FDTD methods, have enjoyed wide success in modeling
photonic-crystal systems, they are not ideally suited for the study of
weak perturbations, such as surface roughness or gradual waveguide
transitions, where a high resolution and/or large computational cells
are required.  Instead, we suggest that these important problems are
ideally suited for semi-analytical methods, which employ perturbative
corrections (typically only needing the lowest order) to the exactly
understood perfect waveguide.  However, semi-analytical methods
developed for the study of conventional waveguides require
modification for high index-contrast, strongly periodic photonic
crystals, and we have developed corrected forms of coupled-wave
theory, perturbation theory, and the volume-current method for this
situation. In this paper, we survey these new developments and
describe the most significant results for adiabatic waveguide
transitions and disorder losses. We present design rules and scaling
laws for adiabatic transitions. In the case of disorder, we show both
analytically and numerically that photonic crystals can suppress
radiation loss without any corresponding increase in reflection,
compared to a conventional strip waveguide with the same modal area,
group velocity, and disorder strength.}
}

@article{KaralisJo04,
pdf = {KaralisJo04.pdf},
author = {Aristeidis Karalis and Steven G. Johnson and J. D. Joannopoulos},
title = {Discrete-mode cancellation mechanism for high-{$Q$} integrated optical cavities with small modal volume},
journal = {Optics Letters},
year = 2004,
volume = 29,
pages = {2309--2311},
doi = {10.1364/OL.29.002309},
abstract = {A mechanism to reduce radiation loss from integrated optical cavities without a complete photonic bandgap is introduced and demonstrated. It is applicable to any device with a patterned substrate (including both low and high index-contrast systems), when it supports discrete guided or leaky modes through which power escaping the cavity can be channeled into radiation. One then achieves the associated increase in $Q$ by designing the cavity such that the near-field pattern becomes orthogonal to these discrete modes, therefore canceling the coupling of power into them and thus reducing the total radiation loss. The method is independent of any delocalization mechanism and can be used to create high-$Q$ cavities with small modal volume.}
}

@article{PovinelliIb04,
pdf = {PovinelliIb04.pdf},
author = {M. L. Povinelli and Mihai Ibanescu and Steven G. Johnson and J. D. Joannopoulos},
title = {Slow-light enhancement of radiation pressure in an omnidirectional-reflector waveguide},
journal = {Applied Physics Letters},
year = 2004,
volume = 85,
pages = {1466--1468},
doi = {10.1063/1.1786660},
abstract = {We study the radiation pressure on the surface of a
waveguide formed by omnidirectionally reflecting mirrors. In the
absence of losses, the pressure goes to infinity as the distance
between the mirrors is reduced to the cutoff separation of the
waveguide mode. This divergence at constant power input is due to the
reduction of the modal group velocity to zero, which results in the
magnification of the electromagnetic field. Our structure suggests a
promising alternative, microscale system for observing the variety of
classical and quantum-optical effects associated with radiation
pressure in Fabry--Perot cavities.}
}

@article{PovinelliJo04,
pdf = {PovinelliJo04.pdf},
author = {M. L. Povinelli and Steven G. Johnson and Elefterios Lidorikis and J. D. Joannopoulos and Marin Solja{\v{c}}i{\'{c}}},
title = {Effect of a photonic band gap on scattering from waveguide disorder},
journal = {Applied Physics Letters},
year = 2004,
volume = 84,
pages = {3639--3641},
doi = {10.1063/1.1723686},
abstract = {We derive a general, analytical, coupled-mode theory for disorder-induced scattering in periodic systems that shows that in the experimentally relevant limit of weak disorder, the reflection in a photonic-crystal waveguide is just as low as in a comparable index-guided waveguide. Moreover, since the photonic band gap also blocks radiative loss, the total scattering loss is reduced, and the total transmission is higher. These general results are verified by direct numerical simulations in an example system.}
}

@article{QiLi04,
pdf = {QiLi04.pdf},
author = {Minghao Qi and Elefterios Lidorikis and Peter T. Rakich and Steven G. Johnson and J. D. Joannopoulos and Erich P. Ippen and Henry I. Smith},
title = {A three-dimensional optical photonic crystal with designed point defects},
journal = {Nature},
year = 2004,
volume = 429,
pages = {538--542},
doi = {10.1038/nature02575},
abstract = {Photonic crystals offer unprecedented opportunities for miniaturization and integration of optical devices. They also exhibit a variety of new physical phenomena, including suppression or enhancement of spontaneous emission, low-threshold lasing, and quantum information processing. Various techniques for the fabrication of three-dimensional (3D) crystals photonicsuch as silicon micromachining, wafer fusion bonding, holographic lithography, self-assembly, angled-etching, micromanipulation, glancing-angle deposition, auto-cloning, have been proposed and demonstrated with different levels of success. However, a critical step towards the fabrication of functional 3D devices, that is, the incorporation of microcavities or waveguides in a controllable way, has not been achieved at optical wavelengths. Here we present the fabrication of 3D photonic crystals that are particularly suited for optical device integration using a lithographic layer-by-layer approach. Point-defect microcavities are introduced during the fabrication process and optical measurements show they have resonant signatures around telecommunications wavelengths (1.3--1.5$\mu$m).  Measurements of reflectance and transmittance at near-infrared are in good agreement with numerical simulations.}
}

@article{WongRa04,
pdf = {WongRa04.pdf},
author = {Chee Wei Wong and Peter T. Rakich and Steven G. Johnson and Minghao Qi and Henry I. Smith and Erich P. Ippen and Lionel C. Kimerling and Yongbae Jeon and George Barbastathis and Sang-Gook Kim},
title = {Strain-tunable silicon photonic band gap microcavities in optical waveguides},
journal = {Applied Physics Letters},
year = 2004,
volume = 84,
pages = {1242--1244},
doi = {10.1063/1.1649803},
abstract = {We report the design, device fabrication, and measurements of tunable silicon photonic band gap microcavities in optical waveguides, using direct application of piezoelectric-induced strain to the photonic crystal. We show, through first-order perturbation computations and experimental measurements, a 1.54 nm shift in cavity resonances at 1.56 $\mu$m wavelengths for an applied strain of 0.04\%. The strain is applied through integrated piezoelectric microactuators. For operation at infrared wavelengths, we combine x-ray and electron-beam lithography with thin-film piezoelectric processing. This level of integration permits realizable silicon-based photonic chip devices, such as high-density optical filters, with active reconfiguration.}
}

@article{AssefaRa04,
pdf = {AssefaRa04.pdf},
author = {Solomon Assefa and Peter T. Rakich and Peter Bienstman and Steven G. Johnson and Gale S. Petrich and John D. Joannopoulos and Leslie A. Kolodziejski and Erich P. Ippen and Henry I. Smith},
title = {Guiding 1.5$\mu$m light in photonic crystals based on dielectric rods},
journal = {Applied Physics Letters},
year = 2004,
volume = 85,
pages = {6110--6112},
doi = {10.1063/1.1840107},
abstract = {Photonic-crystal structures consisting of dielectric rods were designed, fabricated, and optically characterized. The combination of the high refractive-index-contrast GaAs/Al$_x$O$_y$ material system with electron-beam lithography enabled the fabrication of structures suitable for the optical propagation of 1.5 $\mu$m light. Experimental transmission spectra were obtained for structures consisting of a two-dimensional array of rods and line-defect waveguides. Optical measurements confirmed the presence of a photonic band gap, as well as band gap guidance in the line-defect waveguide. A two-stage coupling scheme facilitated efficient optical coupling into the line-defect waveguide. }
}

@article{SoljacicLi04,
pdf = {SoljacicLi04.pdf},
author = {Marin Solja{\v{c}}i{\'{c}} and Elefterios Lidorikis and Mihai Ibanescu and Steven Johnson and J. Joannopoulos and Yoel Fink},
title = {Optical bistability and cutoff solitons in photonic bandgap fibers},
journal = {Optics Express},
year = 2004,
volume = 12,
pages = {1518--1527},
url = {http://www.opticsinfobase.org/abstract.cfm?URI=oe-12-8-1518},
doi = {10.1364/OPEX.12.001518},
abstract = {We present detailed theoretical and numerical analysis of certain novel non-linear optical phenomena enabled by photonic bandgap fibers. In particular, we demonstrate the feasibility of optical bistability in an axially modulated nonlinear photonic bandgap fiber through analytical theory and detailed numerical experiments. At 1.55$\mu$m carrier wavelength, the in-fiber devices we propose can operate with only a few tens of mW of power, have a nearly instantaneous response and recovery time, and be shorter than 100$\mu$m. Furthermore, we predict existence of gap-like solitons (which have thus-far been described only in axially periodic systems) in axially uniform photonic bandgap fibers.}
}

@article{IbanescuJo04,
pdf = {IbanescuJo04.pdf},
author = {M. Ibanescu and S. G. Johnson and D. Roundy and C. Luo and Y. Fink and J. D. Joannopoulos},
title = {Anomalous dispersion relations by symmetry breaking in axially uniform waveguides},
journal = {Physical Review Letters},
year = 2004,
volume = 92,
pages = 063903,
doi = {10.1103/PhysRevLett.92.063903},
abstract = {We show that modes of axially uniform waveguides of arbitrary cross section can be made to have anomalous dispersion relations resulting from strong repulsion between two modes. When the axial wave vector $k$ is 0, the two modes have different TE/TM symmetry and thus can be brought arbitrarily close to an accidental frequency degeneracy. For nonzero $k$, the symmetry is broken causing the modes to repel. When the modes are sufficiently close together this repulsion leads to unusual features such as extremely flattened dispersion relations, backward waves, zero group velocity for nonzero $k$, atypical divergence of the density of states, and nonzero group velocity at $k = 0$.}
}

@article{SasakiOh04,
author = {Y. Sasaki and Y. Ohtera and S. G. Johnson and S. Kawakami},
title = {A reference analytical model of three-dimensional photonic crystal waveguides and their mode spectrum},
journal = {Trans. Inst. Elect. Info. Comm. Eng. C},
year = 2004,
volume = {J87-C},
number = 3,
pages = {328--334}
}

@article{TanakaSu04,
pdf = {TanakaSu04.pdf},
author = {Y. Tanaka and Y. Sugimoto and N. Ikeda and H. Nakamura and K. Asakawa and K. Inoue and S. G. Johnson},
title = {Group velocity dependence of propagation losses in single-line-defect photonic crystal waveguides on {GaAs} membranes},
journal = {Electronics Letters},
year = 2004,
volume = 40,
number = 3,
pages = {174--176},
doi = {10.1049/el:20040114},
abstract = {Group velocity, $v_g$, dependence of propagation loss in single-line-defect photonic crystal waveguides on GaAs membranes, and minimum loss as low as 2.5 dB/mm, are presented.  When $v_g$ is reduced by a factor of 7, an additional loss is found to be only 5 dB/mm, thus proving a feasible usage of low $v_g$.}
}

@article{WongYa04-SPIE,
pdf = {WongYa04-SPIE.pdf},
author = {Chee Wei Wong and Xiaodong Yang and Peter T. Rakich and Steven G. Johnson and Minghao Qi and Yongbae Jeon and George Barbastathis and Sang-Gook Kim},
title = {Strain-tunable photonic bandgap microcavity waveguides in silicon at 1.55 $\mu$m},
journal = {Proc. SPIE},
year = 2004,
volume = 5511,
pages = {156--164},
doi = {10.1117/12.560927},
abstract = {The majority of photonic crystals developed till-date
are not dynamically tunable, especially in silicon-based
structures. Dynamic tunability is required not only for
reconfiguration of the optical characteristics based on user-demand,
but also for compensation against external disturbances and relaxation
of tight device fabrication tolerances. Recent developments in
photonic crystals have suggested interesting possibilities for static
small-strain modulations to affect the optical characteristics1-3,
including a proposal for dynamic strain-tunability4. Here we report
the theoretical analysis, device fabrication, and experimental
measurements of tunable silicon photonic band gap microcavities in
optical waveguides, through direct application of dynamic strain to
the periodic structures5. The device concept consists of embedding the
microcavity waveguide6 on a deformable SiO2 membrane. The membrane is
strained through integrated thin-film piezoelectric microactuators. We
show a 1.54 nm shift in cavity resonances at 1.56 $\mu$m wavelengths
for an applied piezoelectric strain of 0.04\%. This is in excellent
agreement with our modeling, predicted through first-order
semi-analytical perturbation theory7 and finite-difference time-domain
calculations. The measured microcavity transmission shows resonances
between 1.55 to 1.57 $\mu$m, with $Q$ factors ranging from 159 to
280. For operation at infrared wavelengths, we integrate X-ray and
electron-beam lithography (for critical 100 nm feature sizes) with
thin-film piezoelectric surface micromachining. This level of
integration permits realizable silicon-based photonic chip devices,
such as high-density optical filters and spontaneous-emission
enhancement devices with tunable configurations.}
}

@article{SkorobogatiyJa04-SPIE,
pdf = {SkorobogatiyJa04-SPIE.pdf},
author = {Maksim Skorobogatiy and Steven A. Jacobs and Steven G. Johnson and Michel Meunier and Yoel Fink},
title = {Modeling the impact of manufacturing imperfections on photonic crystal device performance: design of perturbation-tolerant {PBG} components},
journal = {Proc. SPIE},
year = 2004,
volume = 5450,
pages = {161--172},
doi = {10.1117/12.545249},
abstract = {Standard perturbation theory (PT) and coupled mode
theory (CMT) formulations fail or exhibit very slow convergence when
applied to the analysis of geometrical variations in high
index-contrast optical components such as Bragg fibers and photonic
crystals waveguides. By formulating Maxwell's equations in
perturbation matched curvilinear coordinates, we have derived several
rigorous PT and CMT expansions that are applicable in the case of
generic non-uniform dielectric profile perturbations in high
index-contrast waveguides. In strong fiber tapers and fiber Bragg
gratings we demonstrate that our formulation is accurate and rapidly
converges to an exact result when used in a CMT framework even in the
high index-contrast regime. We then apply our method to investigate
the impact of hollow Bragg fiber ellipticity on its Polarization Mode
Dispersion (PMD) characteristics for telecom applications. Correct PT
expansions allowed us to design an efficient optimization code which
we successfully applied to the design of dispersion compensating
hollow Bragg fiber with optimized low PMD and very large dispersion
parameter. We have also successfully extended this methodology to
treat radiation scattering due to common geometric variations in
generic photonic crystals. As an example, scattering analysis in
strong 2D photonic crystal tapers is demonstrated.}
}

@article{LuoJo04-SPIE,
pdf = {LuoJo04-SPIE.pdf},
author = {Chiyan Luo and Steven G. Johnson and Marin Solja{\v{c}}i{\'{c}} and John D. Joannopoulos and John B. Pendry},
title = {Novel optical phenomena with photonic crystals},
journal = {Proc. SPIE},
year = 2004,
volume = 5166,
pages = {207--219},
doi = {10.1117/12.507491},
abstract = {In this work we present an introduction to photonic
crystals by discussing the basic concepts and principles behind these
artificial materials, as well as their abilities to control light and
enable unusual optical phenomena.  We will focus on specific examples
including (1) negative refraction of light, (2) the superprism effect
(anomalous electromagnetic dispersion), and (3) the possibility of
superlensing (subwavelength focusing). These are very general results
based on direct solutions of Maxwell's equations, and can consequently
be of relevance to many areas of science and technology.}
}

@article{JohnsonPo05,
pdf = {JohnsonPo05.pdf},
author = {S. G. Johnson and M. L. Povinelli and M. Solja{\v{c}}i{\'{c}} and A. Karalis and S. Jacobs and J. D. Joannopoulos},
title = {Roughness losses and volume-current methods in photonic-crystal waveguides},
journal = {Applied Physics B},
year = 2005,
month = {July},
volume = 81,
number = {2--3},
pages = {283--293},
doi = {10.1007/s00340-005-1823-4},
note = {Invited paper, special issue on photonic crystals.},
abstract = {We present predicted relative scattering losses from sidewall roughness in a strip waveguide compared to an identical waveguide surrounded by a photonic crystal with a complete or incomplete gap in both 2d and 3d. To do so, we develop a new semi-analytical extension of the classic volume-current method'' (Green's functions with a Born approximation), correcting a longstanding limitation of such methods to low-index contrast systems (the classic method may be off by an order of magnitude in high-contrast systems). The resulting loss predictions show that even incomplete gap structures such as photonic-crystal slabs should, with proper design, be able to reduce losses by a factor of two compared to an identical strip waveguide; however, incautious design can lead to increased losses in the photonic-crystal system, a phenomena that we explain in terms of the band structure of the unperturbed crystal.}
}

@article{IbanescuJo05,
pdf = {IbanescuJo05.pdf},
author = {Mihai Ibanescu and Steven G. Johnson and David Roundy and Yoel Fink and J. D. Joannopoulos},
title = {Microcavity confinement based on an anomalous zero group-velocity waveguide mode},
journal = {Optics Letters},
year = 2005,
month = {March},
volume = 30,
pages = {552--554},
doi = {10.1364/OL.30.000552},
abstract = {We propose and demonstrate a mechanism for small-modal-volume high-$Q$ cavities based on an anomalous uniform waveguide mode that has zero group velocity at a nonzero wave vector. In a short piece of a uniform waveguide with a specially designed cross section, light is confined longitudinally by small group-velocity propagation and transversely by a reflective cladding. The quality factor $Q$ is greatly enhanced by the small group velocity for a set of cavity lengths that are separated by approximately $\pi/k_0$, where $k_0$ is the longitudinal wave vector for which the group velocity is zero.}
}

@article{RakichSo05,
pdf = {RakichSo05.pdf},
author = {Peter T. Rakich and Hideyuki Sotobayashi and Juliet T. Gopinath and Steven G. Johnson and Jason W. Sickler and Chee Wei Wong and John D. Joannopoulos and Erich P. Ippen},
title = {Nano-scale photonic crystal microcavity characterization with an all-fiber based 1.2--2.0 $\mu$m supercontinuum},
journal = {Optics Express},
year = 2005,
month = {January},
volume = 13,
pages = {821--825},
url = {http://www.opticsinfobase.org/abstract.cfm?URI=oe-13-3-821},
doi = {10.1364/OPEX.13.000821},
abstract = {The use of ultra-broadband supercontinuum generated by an all-fiber system to characterize high-index contrast photonic circuits over the wavelength range 1.2--2.0 $\mu$m is demonstrated. Efficient, broadband waveguide coupling techniques and sensitive normalized detection enable rapid and high-resolution measurements of nano-scale one-dimensional photonic crystal microcavities. Experimental mappings of bandgaps and cavity mode resonances with a wavelength resolution of 0.1 nm compare well with computer simulations.}
}

@article{PovinelliLo05,
pdf = {PovinelliLo05.pdf},
author = {Michelle L. Povinelli and Marko Lon{\v{c}}ar and Mihai Ibanescu and Elizabeth J. Smythe and Steven G. Johnson and Federico Capasso and John D. Joannopoulos },
title = {Evanescent-wave bonding between optical waveguides},
journal = {Optics Letters},
year = 2005,
month = {November},
volume = 30,
pages = {3042--3044},
doi = {10.1364/OL.30.003042},
abstract = {Forces arising from overlap between the guided waves of parallel, microphotonic waveguides are calculated. Both attractive and repulsive forces, determined by the choice of relative input phase, are found. Using realistic parameters for a silicon-on-insulator material system, we estimate that the forces are large enough to cause observable displacements. Our results illustrate the potential for a broader class of optically tunable microphotonic devices and microstructured artificial materials.}
}

@article{PovinelliJo05-whispering,
pdf = {PovinelliJo05-whispering.pdf},
author = {Michelle Povinelli and Steven Johnson and Marko Lon{\v{c}}ar and Mihai Ibanescu and Elizabeth Smythe and Federico Capasso and J. Joannopoulos},
title = {High-{$Q$} enhancement of attractive and repulsive optical forces between coupled whispering-gallery-mode resonators},
journal = {Optics Express},
year = 2005,
month = {October},
volume = 13,
pages = {8286--8295},
url = {http://www.opticsinfobase.org/abstract.cfm?URI=oe-13-20-8286},
doi = {10.1364/OPEX.13.008286},
abstract = {We have calculated the optically-induced force between coupled high-$Q$ whispering gallery modes of microsphere resonators. Attractive and repulsive forces are found, depending whether the bi-sphere mode is symmetric or antisymmetric. The magnitude of the force is linearly proportional to the total power in the spheres and consequently linearly enhanced by $Q$. Forces on the order of 100 nN are found for $Q=108$, large enough to cause displacements in the range of 1$\mu$m when the sphere is attached to a fiber stem with spring constant 0.004 N/m.}
}

@article{RodriguezIb05,
pdf = {RodriguezIb05.pdf},
author = {Alejandro Rodriguez and M. Ibanescu and J. D. Joannopoulos and Steven G. Johnson},
title = {Disorder-immune confinement of light in photonic-crystal cavities},
journal = {Optics Letters},
year = 2005,
month = {December},
volume = 30,
pages = {3192--3194},
doi = {10.1364/OL.30.003192},
abstract = {We demonstrate by finite-difference time-domain simulations in 2D and 3D that optical cavities in realistic finite photonic crystals have lifetimes and modal volumes that are essentially insensitive to disorder (of various types, including surface disorder and randomized positions), even with unphysically large disorder. A lifetime $Q=10^8$ is demonstrated in a 3D single-mode cavity with a half-wavelength mode diameter using only eight vertical periods of a disordered crystal.}
}

@article{PovinelliJo05,
pdf = {PovinelliJo05.pdf},
author = {M. Povinelli and Steven Johnson and J. Joannopoulos },
title = {Slow-light, band-edge waveguides for tunable time delays},
journal = {Optics Express},
year = 2005,
month = {September},
volume = 13,
pages = {7145--7159},
url = {http://www.opticsinfobase.org/abstract.cfm?URI=oe-13-18-7145},
doi = {10.1364/OPEX.13.007145},
abstract = {We propose the use of slow-light, band-edge waveguides for compact, integrated, tunable optical time delays. We show that slow group velocities at the photonic band edge give rise to large changes in time delay for small changes in refractive index, thereby shrinking device size. Figures of merit are introduced to quantify the sensitivity, as well as the accompanying signal degradation due to dispersion. It is shown that exact calculations of the figures of merit for a realistic, three-dimensional grating structure are well predicted by a simple quadratic-band model, simplifying device design. We present adiabatic taper designs that attain $<0.1$\% reflection in short lengths of 10 to 20 times the grating period. We show further that cascading two gratings compensates for signal dispersion and gives rise to a constant tunable time delay across bandwidths greater than 100GHz. Given typical loss values for silicon-on-insulator waveguides, we estimate that gratings can be designed to exhibit tunable delays in the picosecond range using current fabrication technology.}
}

@article{SkorobogatiyJa05,
pdf = {SkorobogatiyJa05.pdf},
author = {M. Skorobogatiy and S. A. Jacobs and S. G. Johnson and C. Anastassiou and B. Temelkuran},
title = {Heating of hollow photonic {Bragg} fibers from field propagation, coupling, and bending},
journal = {Journal of Lightwave Technology},
year = 2005,
month = {November},
volume = 23,
number = 11,
pages = {3517--3525},
doi = {10.1109/JLT.2005.857778},
abstract = {We investigate heating from field propagation, coupling, and bending, which are the potential failure mechanisms for an emerging new type of high-power radiation guides-hollow photonic Bragg fibers. Continuous wave (CW) and pulsed radiation sources are considered, assuming continuous operation of the laser source.}
}

@article{RakichSo05-SPIE,
pdf = {RakichSo05-SPIE.pdf},
author = {Peter T. Rakich and Hideyuki Sotobayashi and Juliet T. Gopinath and Jason W. Sickler and Chee Wei Wong and Steven G. Johnson and Minghao Qi and Elefterios Lidorikis and Henry I. Smith and John D. Joannopoulos and Erich P. Ippen},
title = {Broadband optical studies of 1{D} and 3{D} photonic crystals},
journal = {Proc. SPIE},
year = 2005,
volume = 6017,
pages = 601702,
note = {Invited paper},
doi = {10.1117/12.631874},
abstract = {Supercontinuum based sources and measurement techniques are developed, enabling optical ultra-broadband studies
of nano-scale photonic crystal devices and integrated photonic circuits over 1.2--2.0 $\mu$m wavelength range.
Experiments involving 1-D periodic photonic crystal microcavity waveguides and 3-D periodic photonic crystals
with embedded point defects are described. Experimental findings are compared with rigorous electromagnetic
simulations.}
}

@article{PovinelliJo05-SPIE,
pdf = {PovinelliJo05-SPIE.pdf},
author = {Michelle L. Povinelli and Steven G. Johnson and John D. Joannopoulos},
title = {High-index-contrast, photonic-band-edge waveguides for tunable time delays},
journal = {Proc. SPIE},
year = 2005,
volume = 5926,
pages = {59260D},
doi = {10.1117/12.617836},
abstract = {We describe the use of high-index-contrast, photonic-crystal wavegides for tunable time delays. The waveguide
is designed such that the operating frequency is near a photonic band edge. In this slow light region, a small
change in index yields a large change in group velocity, and consequently in time delay. Figures of merit for
tunable time delay devices are introduced, including sensitivity, length, and dispersion. We show that a simple
quadratic band model is a good predictor of the figures of merit for realistic, 3D, high-index-contrast structures.
By cascading two grated waveguides, we can obtain a flat tunable time delay across the operating bandwidth.}
}

@article{LuoIb06,
pdf = {LuoIb06.pdf},
author = {Chiyan Luo and Mihai Ibanescu and Evan J. Reed and Steven G. Johnson and J. D. Joannopoulos},
title = {Doppler radiation emitted by an oscillating dipole moving inside a photonic band-gap crystal},
journal = {Physical Review Letters},
year = 2006,
month = {February},
volume = 96,
pages = 043903,
doi = {10.1103/PhysRevLett.96.043903},
abstract = {We study the radiation emitted by an oscillating dipole moving with a constant velocity in a photonic
crystal, and analyze the effects that arise in the presence of a photonic band gap. It is demonstrated
through numerical simulations that the radiation strength may be enhanced or inhibited according to the
photonic band structure, and anomalous effects in the sign and magnitude of the Doppler shifts are
possible, both outside and inside the gap. We suggest that this effect could be used to identify the physical
origin of the backward waves in recent metamaterials.}
}

@article{FarjadpourRo06,
author = {Ardavan Farjadpour and David Roundy and Alejandro Rodriguez and Mihai Ibanescu and Peter Bermel and J. D. Joannopoulos and Steven G. Johnson and Geoffrey Burr},
title = {Improving accuracy by subpixel smoothing in {FDTD}},
journal = {Optics Letters},
year = 2006,
month = {October},
volume = 31,
pages = {2972--2974},
url = {http://www.opticsinfobase.org/abstract.cfm?URI=ol-31-20-2972},
doi = {10.1364/OL.31.002972},
abstract = {Finite-difference time-domain (FDTD) methods suffer from reduced accuracy when modeling discontinuous
dielectric materials, due to the inhererent discretization (pixelization). We show that accuracy can be significantly
improved by using a subpixel smoothing of the dielectric function, but only if the smoothing
scheme is properly designed. We develop such a scheme based on a simple criterion taken from perturbation
theory and compare it with other published FDTD smoothing methods. In addition to consistently achieving
the smallest errors, our scheme is the only one that attains quadratic convergence with resolution for arbitrarily
sloped interfaces. Finally, we discuss additional difficulties that arise for sharp dielectric corners.}
}

@article{BermelRo06,
pdf = {BermelRo06.pdf},
author = {Peter Bermel and Alejandro Rodriguez and Steven G. Johnson and John D. Joannopoulos and Marin Solja{\v{c}}i{\'{c}}},
title = {Single-photon all-optical switching using waveguide-cavity quantum electrodynamics},
journal = {Physical Review~A},
year = 2006,
month = {October},
volume = 74,
pages = 043818,
doi = {10.1103/PhysRevA.74.043818},
abstract = {This paper demonstrates switching of a single signal photon by a single gating photon of a different frequency, via a cross-phase-modulation. This effect is mediated by materials exhibiting electromagnetically induced transparency (EIT), which are embedded in photonic crystals (PhCs). An analytical model based on waveguide-cavity QED is constructed for our system, which consists of a PhC waveguide and a PhC microcavity containing a four-level EIT atom. It is solved exactly and analyzed using experimentally accessible parameters. It is found that the strong coupling regime is required for lossless two-photon quantum entanglement.}
}

@article{PovinelliLo06-SPIE,
pdf = {PovinelliLo06-SPIE.pdf},
author = {M. L. Povinelli and M. Lon{\v{c}}ar and E. J. Smythe and M. Ibanescu and S. G. Johnson and F. Capasso and J. D. Joannopoulos},
title = {Enhancement mechanisms for optical forces in integrated optics},
journal = {Proc. SPIE},
year = 2006,
volume = 6326,
pages = 632609,
doi = {10.1117/12.681066},
abstract = {We investigate the extension of optical micromanipulation to integrated optics. In particular, we consider whether
propagating light signals can cause mechanical reconfiguration of a device. While such forces are intrinsically
weak, we predict theoretically that significant displacements can be achieved using various enhancement mechanisms.
These include the use of high-index materials, high-$Q$ (cavity quality factor) enhancement, and slow
light in photonic crystals. Silicon optical waveguides have a considerable refractive index contrast with the surrounding
air, with a ratio of roughly 3.45/1 at optical communications wavelengths. We show that the strong
confinement of light to silicon magnifies optical forces arising from overlap in the guided modes of neighboring
waveguides. Silica microsphere resonators are known to have extremely high cavity quality factors, in excess of
108. We show that the quality factor of the resonator magnifies the optical force due to modal overlap between
two neighboring spheres. Thirdly, we investigate slow-light enhancement of optical forces using photonic-crystal
devices. We show that slow-light velocities give rise to larger forces for the same amount of signal power, enhancing
optomechanical coupling effects. In addition to being of fundamental interest, our work suggests that
optical manipulation may ultimately provide a route to all-optical conformational control and switching.}
}

@article{FarjadpourRo06-SPIE,
author = {A. Farjadpour and D. Roundy and A. Rodriguez and M. Ibanescu and P. Bermel and J. D. Joannopoulos and S. G. Johnson and G. W. Burr},
title = {Improving accuracy by sub-pixel smoothing in {FDTD}},
journal = {Proc. SPIE},
year = 2006,
volume = 6322,
pages = {63220G},
doi = {10.1117/12.706155},
abstract = {Finite-difference time-domain (FDTD) methods suffer from
reduced accuracy when modeling discontinuous dielectric materials, due
to the inhererent discretization (pixellization''). We show that
accuracy can be significantly improved by using a sub-pixel smoothing
of the dielectric function, but only if the smoothing scheme is
properly designed. We develop such a scheme based on a simple
criterion taken from perturbation theory, and compare it to other
published FDTD smoothing methods. In addition to consistently
achieving the smallest errors, our scheme is the only one that attains
quadratic convergence with resolution for arbitrarily sloped
interfaces. Finally, we discuss additional difficulties that arise for
sharp dielectric corners.}
}

@article{PovinelliJo06-SPIE,
pdf = {PovinelliJo06-SPIE.pdf},
author = {M. L. Povinelli and S. G. Johnson and J. D. Joannopoulos },
title = {Tunable time delays in photonic-crystal waveguides},
journal = {Proc. SPIE},
year = 2006,
volume = 6128,
pages = {61280R},
doi = {10.1117/12.646738},
abstract = {We study tunable time-delay devices in which the time delay is tuned by changing the group velocity of the
propagating signal. The device is designed to place the operating frequency near a photonic band edge. This
enhances the change in delay for a given tuning range of the device refractive index. Here we provide an extended
explanation of mode symmetry, nomenclature, and the complete band structure of a sample, integrated device
to aid the understanding of our previously published work.}
}

@article{IbanescuSo06-SPIE,
pdf = {IbanescuSo06-SPIE.pdf},
author = {Mihai Ibanescu and Marin Solja{\v{c}}i{\'{c}} and Steven G. Johnson and J. D. Joannopoulos},
title = {Ultra-flat bands in two-dimensional photonic crystals},
journal = {Proc. SPIE},
year = 2006,
volume = 6128,
pages = 612808,
note = {Invited paper.},
doi = {10.1117/12.652776},
abstract = {We show that two-dimensional photonic crystals can be designed to have dispersion relations with an extended ultraflat
cross-section, meaning that for a fixed wave vector wave vector component $k_x$ the frequency of a band is almost constant when the other wave vector component $k_y$ takes all possible values.  these ultra-flat are the result of a non-trivial saddle point in the dispersion relation located in the interior of the Brillouin zone. Interesting consequences include
1D-like behavior, improved super-collimation, and enhanced density of states.}
}

@article{RodriguezSo07,
pdf = {RodriguezSo07.pdf},
author = {Alejandro Rodriguez and Marin Solja{\v{c}}i{\'{c}} and J. D. Joannopoulos and Steven G. Johnson},
title = {$\chi^{(2)}$ and $\chi^{(3)}$ harmonic generation at a critical power in inhomogeneous doubly resonant cavities},
journal = {Optics Express},
year = 2007,
volume = 15,
number = 12,
pages = {7303--7318},
eprint = {arXiv:0704.1890v1},
month = {May},
url = {http://www.opticsinfobase.org/abstract.cfm?URI=oe-15-12-7303},
doi = {10.1364/OE.15.007303},
abstract = {We derive general conditions for 100\% frequency conversion in any doubly resonant nonlinear cavity, for both second- and third-harmonic generation via $\chi^{(2)}$ and $\chi^{(3)}$ nonlinearities. We find that conversion efficiency is optimized for a certain critical'' power depending on the cavity parameters, and assuming reasonable parameters we predict 100\% conversion using milliwatts of power or less. These results follow from a semi-analytical coupled-mode theory framework which is generalized from previous work to include both $\chi^{(2)}$ and $\chi^{(3)}$ media as well as inhomogeneous (fully vectorial) cavities, analyzed in the high-efficiency limit where down-conversion processes lead to a maximum efficiency at the critical power, and which is verified by direct finite-difference time-domain (FDTD) simulations of the nonlinear Maxwell equations. Explicit formulas for the nonlinear coupling coefficients are derived in terms of the linear cavity eigenmodes, which can be used to design and evaluate cavities in arbitrary geometries.}
}

@article{RodriguezIb07,
pdf = {RodriguezIb07.pdf},
author = {Alejandro Rodriguez and Mihai Ibanescu and Davide Iannuzzi and Federico Capasso and J. D. Joannopoulos and Steven G. Johnson},
title = {Computation and visualization of {Casimir} forces in arbitrary geometries: Nonmonotonic lateral-wall forces and the failure of proximity-force approximations},
journal = {Physical Review Letters},
year = 2007,
volume = 99,
pages = 080401,
month = {August},
doi = {10.1103/PhysRevLett.99.080401},
abstract = {We present a method of computing Casimir forces for arbitrary geometries, with any desired accuracy, that can directly exploit the efficiency of standard numerical-electromagnetism techniques. Using the simplest possible finite-difference implementation of this approach, we obtain both agreement with past results for cylinder-plate geometries, and also present results for new geometries. In particular, we examine a pistonlike problem involving two dielectric and metallic squares sliding between two metallic walls, in two and three dimensions, respectively, and demonstrate nonadditive and nonmonotonic changes in the force due to these lateral walls.}
}

@article{AbadFa07,
author = {Jorge Bravo-Abad and Shanhui Fan and Steven G. Johnson and John D. Joannopoulos and Marin Solja{\v{c}}i{\'{c}}},
title = {Modeling nonlinear optical phenomena in nanophotonics},
journal = {Journal of Lightwave Technology},
year = 2007,
volume = 25,
number = 9,
pages = {2539--2546},
month = {September},
note = {Invited paper},
doi = {10.1109/JLT.2007.903547},
abstract = {In this paper, we review various numerical methods currently used to model nonlinear optical processes in nanophotonics. Among the different theoretical frameworks that have been used to study nonlinear photonic structures, we particularly focus on the application of both perturbation theory and coupled-mode theory to the analysis of complex nonlinear nanophotonic devices. This description is illustrated on several examples of how these techniques can be used to design photonic-crystal-based nonlinear devices. In addition, in all these examples, we show that the predictions made by the two mentioned techniques are in a good agreement with the numerical results obtained from a nonlinear finite-difference-time-domain approach to these problems.}
}

@article{RodriguezIb07-pra,
pdf = {RodriguezIb07-pra.pdf},
author = {Alejandro Rodriguez and Mihai Ibanescu and Davide Iannuzzi and John D. Joannopoulos and Steven G. Johnson},
title = {Virtual photons in imaginary time: Computing exact {Casimir} forces via standard numerical-electromagnetism techniques},
journal = {Physical Review~A},
year = 2007,
volume = 76,
pages = {032106},
eprint = {arXiv:0705.3661},
month = {September},
doi = {10.1103/PhysRevA.76.032106},
abstract = {We describe a numerical method to compute Casimir forces in arbitrary geometries, for arbitrary dielectric and metallic materials, with arbitrary accuracy (given sufficient computational resources). Our approach, based on well-established integration of the mean stress tensor evaluated via the fluctuation-dissipation theorem, is designed to directly exploit fast methods developed for classical computational electromagnetism, since it only involves repeated evaluation of the Green's function for imaginary frequencies (equivalently, real frequencies in imaginary time). We develop the approach by systematically examining various formulations of Casimir forces from the previous decades and evaluating them according to their suitability for numerical computation. We illustrate our approach with a simple finite-difference frequency-domain implementation, test it for known geometries such as a cylinder and a plate, and apply it to new geometries. In particular, we show that a pistonlike geometry of two squares sliding between metal walls, in both two and three dimensions with both perfect and realistic metallic materials, exhibits a surprising non-monotonic lateral'' force from the walls.}
}

@article{AbadRo07,
author = {Jorge Bravo-Abad and Alejandro Rodriguez and Peter Bermel and Steven G. Johnson and John D. Joannopoulos and Marin Solja{\v{c}}i{\'{c}}},
title = {Enhanced nonlinear optics in photonic-crystal microcavities},
journal = {Optics Express},
year = 2007,
month = {November},
volume = 15,
number = 24,
pages = {16161--16176},
doi = {10.1364/OE.15.016161},
url = {http://www.opticsinfobase.org/abstract.cfm?URI=oe-15-24-16161},
abstract = {Nonlinear photonic-crystal microresonators offer unique fundamental ways of enhancing a variety of nonlinear optical processes. This enhancement improves the performance of nonlinear optical devices to such an extent that their corresponding operation powers and switching times are suitable for their implementation in realistic ultrafast integrated optical devices. Here, we review three different nonlinear optical phenomena that can be strongly enhanced in photonic crystal microcavities. First, we discuss a system in which this enhancement has been successfully demonstrated both theoretically and experimentally, namely, a photonic crystal cavity showing optical bistability properties. In this part, we also present the physical basis for this dramatic improvement with respect to the case of traditional nonlinear devices based on nonlinear Fabry-Perot etalons. Secondly, we show how nonlinear photonic crystal cavities can be also used to obtain complete second-harmonic frequency conversion at very low input powers. Finally, we demonstrate that the nonlinear susceptibility of materials can be strongly modified via the so-called Purcell effect, present in the resonant cavities under study.}
}

@article{ZaheerRo07,
pdf = {ZaheerRo07.pdf},
author = {Saad Zaheer and Alejandro W. Rodriguez and Steven G. Johnson and Robert L. Jaffe},
title = {Optical-approximation analysis of sidewall-spacing effects on the force between two squares with parallel sidewalls},
journal = {Physical Review~A},
year = 2007,
volume = 76,
pages = 063816,
month = {December},
doi = {10.1103/PhysRevA.76.063816},
abstract = {Using the ray-optics approximation, we analyze the Casimir force in a two-dimensional domain formed by two metallic blocks adjacent to parallel metallic sidewalls, which are separated from the blocks by a finite distance $h$. For $h>0$, the ray-optics approach is not exact because diffraction effects are neglected. Nevertheless, we show that ray optics is able to qualitatively reproduce a surprising effect recently identified in an exact numerical calculation: the force between the blocks varies nonmonotonically with $h$. In this sense, the ray-optics approach captures an essential part of the physics of multibody interactions in this system, unlike simpler pairwise-interaction approximations such as proximity force approximations (PFA). Furthermore, by comparison to the exact numerical results, we are able to quantify the impact of diffraction on Casimir forces in this geometry.}
}

@article{GhebrebrhanIb07,
pdf = {GhebrebrhanIb07.pdf},
author = {M. Ghebrebrhan and M. Ibanescu and Steven G. Johnson and M. Solja{\v{c}}i{\'{c}} and J. D. Joannopoulos},
title = {Distinguishing zero-group-velocity modes in photonic crystals},
journal = {Physical Review~A},
year = 2007,
volume = 76,
pages = 063810,
month = {December},
doi = {10.1103/PhysRevA.76.063810},
abstract = {We examine differences between various zero-group-velocity modes in photonic crystals, including those that arise from Bragg diffraction, anticrossings, and band repulsion. Zero-group velocity occurs at points where the group velocity changes sign, and therefore is conceptually related to left-hande'' media, in which the group velocity is opposite to the phase velocity. We consider this relationship more quantitatively in terms of the Fourier decomposition of the modes, by defining a measure of how much the average'' phase velocity is parallel to the group velocity---an anomalous region is one in which they are mostly antiparallel. We find that this quantity can be used to qualitatively distinguish different zero-group-velocity points. In one dimension, such anomalous regions are found never to occur. In higher dimensions, they are exhibited around certain zero-group-velocity points, and lead to unusual enhanced confinement behavior in microcavities.}
}

@article{LeeFa08-SPIE,
pdf = {LeeFa08-SPIE.pdf},
author = {Karen K. Lee and Ardavan Farjadpour and Yehuda Avniel and J. D. Joannopoulos and Steven G. Johnson},
title = {A tale of two limits: fundamental properties of photonic-crystal fibers},
journal = {Proc. SPIE},
year = 2008,
volume = 6901,
pages = {69010K},
month = {January},
doi = {10.1117/12.778570},
note = {Invited paper},
abstract = {We present analytical results that shed new light on the properties of photonic-crystal fibers (optical fibers with periodic structures in their cladding). First, we discuss a general theorem, applicable to any periodic cladding structure, that gives rigorous conditions for the existence of cutoff-free guided modes-it lets you look at a structure, in most cases without calculation, and by inspection give a rigorous guarantee that index-guiding will occur. This theorem especially illuminates the long-wavelength limit, which has proved diffcult to study numerically, to show that the index-guided modes in photonic-crystal fibers (like their step-index counterparts) need not have any theoretical cutoff for guidance. Second, we look in the opposite regime, that of very short wavelengths. As previously identified by other authors, there is a scalar approximation that becomes exact in this limit, even for very high contrast fibers. We show that this scalar'' limit has consequences for practical operation at finite wavelengths that do not seem to have been fully appreciated: it tells you when band gaps arise and between which bands, reveals the symmetry and LP'' degeneracies of the modes, and predicts the scaling of cladding-related losses (roughness, absorption, etc.) as the size of a hollow core is increased. }
}

@incollection{JohnsonJo04,
author = {S. G. Johnson and J. D. Joannopoulos},
title = {Photonic Crystals: Electromagnetic Theory},
booktitle = {Encyclopedia of Modern Optics},
pages = {120--127},
publisher = {Elsevier},
year = 2004,
editor = {B. D. Guenther and D. G. Steel and L. Bayvel},
month = {November},
doi = {10.1016/B0-12-369395-0/00926-X}
}

@incollection{JohnsonSo04,
author = {S. G. Johnson and Marin Solja{\v{c}}i{\'{c}} and J. D. Joannopoulos},
title = {Photonic crystals},
booktitle = {Encyclopedia of Nonlinear Science},
publisher = {Routledge, Taylor and Francis Group},
year = 2005,
editor = {Alwyn Scott},
month = {July},
isbn = {1579583857}
}

@incollection{JacobsTe06,
author = {Steven A. Jacobs and Burak Temelkuran and Ori Weisberg and Mihai Ibanescu and Steven G. Johnson and Marin Solja{\v{c}}i{\'{c}}},
title = {Hollow Core Fibers},
booktitle = {Specialty Optical Fibers Handbook},
publisher = {Elsevier},
year = 2006,
editor = {Alexis Mendez and T. Morse},
chapter = 11,
month = {December},
isbn = {9780123694065}
}

@incollection{JoannopoulosFa01,
author = {J. D. Joannopoulos and S. Fan and A. Mekis and S. G. Johnson},
title = {Novelties of Light with Photonic Crystals},
booktitle = {Photonic Crystals and Light Localization in the 21st Century},
pages = {1--24},
publisher = {Kluwer},
year = 2001,
editor = {Costas M. Soukoulis},
volume = 563,
series = {NATO Science Series C: Mathematical and Physical Sciences},
month = {May},
isbn = {0792369483}
}

@article{ShaoJo07-dct2,
author = {Xuancheng Shao and Steven G. Johnson},
title = {Type-{II}/{III} {DCT}/{DST} algorithms with reduced number of arithmetic operations},
journal = {Signal Processing},
volume = 88,
pages = {1553--1564},
year = 2008,
month = {June},
eprint = {arXiv:cs/0703150},
doi = {10.1016/j.sigpro.2008.01.004},
abstract = {We present algorithms for the discrete cosine transform (DCT) and discrete sine transform (DST), of types II and III, that achieve a lower count of real multiplications and additions than previously published algorithms, without sacrificing numerical accuracy. Asymptotically, the operation count is reduced from $2 N \log_2 N + O(N)$ to $\frac{17}{9} N \log_2 N + O(N)$ for a power-of-two transform size $N$. Furthermore, we show that a further $N$ multiplications may be saved by a certain rescaling of the inputs or outputs, generalizing a well-known technique for $N=8$ by Arai et al. These results are derived by considering the DCT to be a special case of a DFT of length $4N$, with certain symmetries, and then pruning redundant operations from a recent improved fast Fourier transform algorithm (based on a recursive rescaling of the conjugate-pair split radix algorithm). The improved algorithms for DCT-III, DST-II, and DST-III follow immediately from the improved count for the DCT-II.}
}

@article{ShaoJo07-dct4,
author = {Xuancheng Shao and Steven G. Johnson},
title = {Type-{IV} {DCT}, {DST}, and {MDCT} algorithms with reduced numbers of arithmetic operations},
journal = {Signal Processing},
volume = 88,
pages = {1313--1326},
year = 2008,
month = {June},
eprint = {arXiv:0708.4399},
doi = {10.1016/j.sigpro.2007.11.024},
abstract = {We present algorithms for the type-IV discrete cosine transform (DCT-IV) and discrete sine transform (DST-IV), as well as for the modified discrete cosine transform (MDCT) and its inverse, that achieve a lower count of real multiplications and additions than previously published algorithms, without sacrificing numerical accuracy. Asymptotically, the operation count is reduced from $2N\log_{2}N + O(N)$ to $\frac{17}{9}N\log_{2}N + O(N)$ for a power-of-two transform size $N$, and the exact count is strictly lowered for $N \geq 8$. These results are derived by considering the DCT to be a special case of a DFT of length $8N$, with certain symmetries, and then pruning redundant operations from a recent improved fast Fourier transform algorithm (based on a recursive rescaling of the conjugate-pair split radix algorithm). The improved algorithms for DST-IV and MDCT follow immediately from the improved count for the DCT-IV.}
}

@book{JoannopoulosJo08-book,
author = {John D. Joannopoulos and Steven G. Johnson and Joshua N. Winn and Robert D. Meade},
title = {Photonic Crystals: Molding the Flow of Light},
publisher = {Princeton University Press},
year = 2008,
edition = {second},
month = {February},
url = {http://ab-initio.mit.edu/book},
isbn = {9781400828241},
abstract = {Since it was first published in 1995, {\it Photonic Crystals} has remained the definitive text for both undergraduates and researchers on photonic band-gap materials and their use in controlling the propagation of light. This newly expanded and revised edition covers the latest developments in the field, providing the most up-to-date, concise, and comprehensive book available on these novel materials and their applications.

Starting from Maxwell's equations and Fourier analysis, the authors develop the theoretical tools of photonics using principles of linear algebra and symmetry, emphasizing analogies with traditional solid-state physics and quantum theory. They then investigate the unique phenomena that take place within photonic crystals at defect sites and surfaces, from one to three dimensions. This new edition includes entirely new chapters describing important hybrid structures that use band gaps or periodicity only in some directions: periodic waveguides, photonic-crystal slabs, and photonic-crystal fibers. The authors demonstrate how the capabilities of photonic crystals to localize light can be put to work in devices such as filters and splitters. A new appendix provides an overview of computational methods for electromagnetism. Existing chapters have been considerably updated and expanded to include many new three-dimensional photonic crystals, an extensive tutorial on device design using temporal coupled-mode theory, discussions of diffraction and refraction at crystal interfaces, and more. Richly illustrated and accessibly written, {\it Photonic Crystals} is an indispensable resource for students and researchers.}
}

@book{JohnsonJo02-road,
author = {Steven G. Johnson and John D. Joannopoulos},
title = {Photonic Crystals: The Road from Theory to Practice},
publisher = {Springer},
year = 2002,
month = {January},
isbn = {978-0-7923-7609-5},
abstract = {{\it Photonic Crystals: The Road from Theory to Practice} explores the theoretical road leading to the practical application of photonic band gaps. These new optimal devices are based on symmetry and resonance and the benefits and limitations of hybrid two dimensional'' slab systems in three dimensions. The book also explains that they also signify a return to the ideal of an omnidirectional band gap in a structure inspired by and emulating the simplicity of two dimensions. Finally, the book takes a look at computational methods to solve the mathematical problems that underlie all undertakings in this field. {\it Photonic Crystals: The Road from Theory to Practice} should rapidly bring the optical professional and engineer up to speed on this intersection of electromagnetism and solid-state physics. It will also provide an excellent addition to any graduate course in optics.}
}

@article{RodriguezMc08,
pdf = {RodriguezMc08.pdf},
author = {Alejandro W. Rodriguez and Alexander P. McCauley and Yehuda Avniel and Steven G. Johnson},
title = {Computation and visualization of photonic quasicrystal spectra via {Bloch}'s theorem},
journal = {Physical Review~B},
year = 2008,
volume = 77,
pages = {104201},
month = {March},
doi = {10.1103/PhysRevB.77.104201},
abstract = {Previous methods for determining photonic quasicrystal (PQC) spectra have relied on the use of large supercells to compute the eigenfrequencies and/or local density of states (LDOS). In this manuscript, we present a method by which the energy spectrum and the eigenstates of a PQC can be obtained by solving Maxwell's equations in higher dimensions for any PQC defined by the standard cut-and-project construction, to which a generalization of Bloch's theorem applies. In addition, we demonstrate how one can compute band structures with defect states in the higher-dimensional superspace with no additional computational cost. As a proof of concept, these general ideas are demonstrated for the simple case of one-dimensional quasicrystals, which can also be solved by simple transfer-matrix techniques.}
}

@article{RahiRo08,
pdf = {RahiRo08.pdf},
author = {Sahand Jamal Rahi and Alejandro W. Rodriguez and Thorsten Emig and Robert L. Jaffe and Steven G. Johnson and Mehran Kardar},
title = {Nonmonotonic effects of parallel sidewalls on {Casimir} forces between cylinders},
journal = {Physical Review~A},
year = 2008,
volume = 77,
pages = {030101(R)},
eprint = {arXiv:0711.1987},
month = {March},
doi = {10.1103/PhysRevA.77.030101},
abstract = {We analyze the Casimir force between two parallel infinite metal cylinders with nearby metal plates using two methods. Surprisingly, the attractive force between cylinders depends nonmonotonically on the separation from the plate(s), and the cylinder-plate force depends nonmonotonically on the separation of the cylinders. These multibody phenomenona do not follow from simple two-body force descriptions. We can explain the nonmonotonicity with the screening (enhancement) of the interactions by the fluctuating charges (currents) on the two cylinders and their images on the nearby plate(s).}
}

@article{KottkeFa08,
pdf = {KottkeFa08.pdf},
author = {Chris Kottke and Ardavan Farjadpour and Steven G. Johnson},
title = {Perturbation theory for anisotropic dielectric interfaces, and application to sub-pixel smoothing of discretized numerical methods},
journal = {Physical Review~E},
year = 2008,
volume = 77,
pages = {036611},
doi = {10.1103/PhysRevE.77.036611},
month = {March},
abstract = {We derive a correct first-order perturbation theory in electromagnetism for cases where an interface between two anisotropic dielectric materials is slightly shifted. Most previous perturbative methods give incorrect results for this case, even to lowest order, because of the complicated discontinuous boundary conditions on the electric field at such an interface. Our final expression is simply a surface integral, over the material interface, of the continuous field components from the unperturbed structure. The derivation is based on a localized'' coordinate-transformation technique, which avoids both the problem of field discontinuities and the challenge of constructing an explicit coordinate transformation by taking a limit in which a coordinate perturbation is infinitesimally localized around the boundary. Not only is our result potentially useful in evaluating boundary perturbations, e.g. from fabrication imperfections, in highly anisotropic media such as many metamaterials, but it also has a direct application in numerical electromagnetism. In particular, we show how it leads to a sub-pixel smoothing scheme to ameliorate staircasing effects in discretized simulations of anisotropic media, in such a way as to greatly reduce the numerical errors compared to other proposed smoothing schemes.}
}

@article{LeeAv08,
pdf = {LeeAv08.pdf},
author = {Karen K. Y. Lee and Yehuda Avniel and Steven G. Johnson},
title = {Rigorous sufficient conditions for index-guided modes in microstructured dielectric waveguides},
journal = {Optics Express},
year = 2008,
volume = {16},
pages = {9261--9275},
month = {June},
url = {http://www.opticsinfobase.org/abstract.cfm?URI=oe-16-13-9261},
doi = {10.1364/OE.16.009261},
abstract = {We derive a sufficient condition for the existence of index-guided modes in a very general class of dielectric waveguides, including photonic-crystal fibers (arbitrary periodic claddings, such as holey fibers''), anisotropic materials, and waveguides with periodicity along the propagation direction.  This condition provides a rigorous guarantee of cutoff-free index-guided modes in any such structure where the core is formed by increasing the index of refraction (e.g. removing a hole).  It also provides a weaker guarantee of guidance in cases where the refractive index is increased on average'' (precisely defined).  The proof is based on a simple variational method, inspired by analogous proofs of localization for two-dimensional attractive potentials in quantum mechanics.}
}

@article{RodriguezJo08,
pdf = {RodriguezJo08.pdf},
author = {Alejandro W. Rodriguez and John D. Joannopoulos and Steven G. Johnson},
title = {Repulsive and attractive {Casimir} forces in a glide-symmetric geometry},
journal = {Physical Review~A},
year = 2008,
volume = 77,
pages = {062107},
month = {June},
doi = {10.1103/PhysRevA.77.062107},
abstract = {We describe a three-dimensional geometry in which both attractive and repulsive Casimir forces arise using ordinary metallic materials, as computed via an exact numerical method (no uncontrolled approximations). The geometry consists of a zipperlike, glide-symmetric structure formed of interleaved metal brackets attached to parallel plates---because of the interleaving pattern, a net repulsive force can arise from a combination of attractive interactions. Depending on the separation, the perpendicular force between the plates and brackets varies from attractive (large separations) to repulsive (intermediate distances) and back to attractive (close separations), with one point of stable equilibrium in the perpendicular direction. This geometry was motivated by a simple intuition of attractive interactions between surfaces, and so we also consider how a rough proximity-force approximation of pairwise attractions compares to the exact calculations.},
note = {Invited paper in June 30, 2008, issue of the {\it Virtual Journal of Nanoscale Science & Technology}.}
}

@article{OskooiZh08,
author = {Ardavan F. Oskooi and Lei Zhang and Yehuda Avniel and Steven G. Johnson},
title = {The failure of perfectly matched layers, and towards their redemption by adiabatic absorbers},
journal = {Optics Express},
month = {July},
year = 2008,
volume = 16,
pages = {11376--11392},
url = {http://www.opticsinfobase.org/abstract.cfm?URI=oe-16-15-11376},
doi = {10.1364/OE.16.011376},
abstract = {Although perfectly matched layers (PMLs) have been widely used to truncate numerical simulations of electromagnetism and other wave equations, we point out important cases in which a PML fails to be reflectionless even in the limit of infinite resolution. In particular, the underlying coordinate-stretching idea behind PML breaks down in photonic crystals and in other structures where the material is not an analytic function in the direction perpendicular to the boundary, leading to substantial reflections. The alternative is an adiabatic absorber, in which reflections are made negligible by gradually increasing the material absorption at the boundaries, similar to a common strategy to combat discretization reflections in PMLs. We demonstrate the fundamental connection between such reflections and the smoothness of the absorption profile via coupled-mode theory, and show how to obtain higher-order and even exponential vanishing of the reflection with absorber thickness (although further work remains in optimizing the constant factor).}
}

@article{Hamam08,
author = {Rafif E. Hamam and Mihai Ibanescu and Evan J. Reed and Peter Bermel and Steven G. Johnson and Erich Ippen and J. D. Joannopoulos and Marin Solja{\v{c}}i{\'{c}}},
title = {Purcell effect in nonlinear photonic structures: a coupled mode theory analysis},
journal = {Optics Express},
year = 2008,
volume = 16,
pages = {12523--12537},
month = {August},
url = {http://www.opticsinfobase.org/abstract.cfm?URI=oe-16-17-12523},
doi = {10.1364/OE.16.012523},
abstract = {We develop a coupled mode theory (CMT) model of the behavior of a polarization source in a general photonic structure, and obtain an analytical expression for the resulting generated electric field; loss, gain and/or nonlinearities can also be modeled. Based on this treatment, we investigate the criteria needed to achieve an enhancement in various nonlinear effects, and to produce efficient sources of terahertz radiation, in particular. Our results agree well with exact finite-difference time-domain (FDTD) results. Therefore, this approach can also in certain circumstances be used as a potential substitute for the more numerically intensive FDTD method.}
}

@article{LeeAv08-singlepol,
author = {Karen K. Lee and Yehuda Avniel and Steven G. Johnson},
title = {Design strategies and rigorous conditions for single-polarization single-mode waveguides},
journal = {Optics Express},
year = 2008,
volume = 16,
pages = {15170--15184},
month = {September},
url = {http://www.opticsinfobase.org/abstract.cfm?URI=oe-16-19-15170},
doi = {10.1364/OE.16.015170},
abstract = {We establish rigorous necessary analytical conditions for the existence of single-polarization single-mode (SPSM) bandwidths in index-guided microstructured waveguides (such as photonic-crystal fibers). These conditions allow us to categorize designs for SPSM waveguides into four strategies, at least one of which seems previously unexplored. Conversely, we obtain rigorous sufficient conditions for the existence of two cutoff-free index-guided modes in a wide variety of microstructured dielectric waveguides with arbitrary periodic claddings, based on the existence of a degenerate fundamental mode of the cladding (a degenerate light line). We show how such a degenerate light line, in turn, follows from the symmetry of the cladding. }
}

@article{RodriguezMu08-suspension,
pdf = {RodriguezMu08-suspension.pdf},
author = {Alejandro W. Rodriguez and J. N. Munday and J. D. Joannopoulos and Federico Capasso and Diego A. R. Dalvit and Steven G. Johnson},
title = {Stable suspension and dispersion-induced transitions from repulsive {Casimir} forces between fluid-separated eccentric cylinders},
journal = {Physical Review Letters},
year = 2008,
volume = 101,
pages = 190404,
eprint = {arXiv:0807.4166},
month = {November},
doi = {10.1103/PhysRevLett.101.190404},
abstract = {We numerically demonstrate a stable mechanical suspension of a silica cylinder within a metallic cylinder separated by ethanol, via a repulsive Casimir force between the silica and the metal. We investigate cylinders with both circular and square cross sections, and show that the latter exhibit a stable orientation as well as a stable position, via a method to compute Casimir torques for finite objects. Furthermore, the stable orientation of the square cylinder undergoes a $45^\circ$ transition as the separation length scale is varied, which is explained as a consequence of material dispersion.}
}

@article{HashemiRo09,
pdf = {HashemiRo09.pdf},
author = {Hila Hashemi and Alejandro W. Rodriguez and J. D. Joannopoulos and Marin Solja{\v{c}}i{\'{c}} and Steven G. Johnson},
title = {Nonlinear harmonic generation and devices in doubly-resonant {Kerr} cavities},
journal = {Physical Review~A},
year = 2009,
volume = 79,
pages = 013812,
eprint = {arXiv:0808.3122},
month = {January},
doi = {10.1103/PhysRevA.79.013812},
abstract = {We describe a theoretical analysis of the nonlinear
dynamics of third-harmonic generation
($\omega\to3\omega$) via Kerr ($\chi^{(3)}$)
nonlinearities in a resonant cavity with resonances
at both $\omega$ and $3\omega$.  Such a doubly
resonant cavity greatly reduces the required power
for efficient harmonic generation, by a factor of
$\sim V/Q^2$ where $V$ is the modal volume and $Q$
is the lifetime, and can even exhibit 100\% harmonic
conversion efficiency at a critical input power.
However, we show that it also exhibits a rich
variety of nonlinear dynamics, such as multistable
solutions and long-period limit cycles. We describe
how to compensate for self- and cross-phase modulation
(which otherwise shifts the cavity frequencies out
of resonance), and how to excite the different
stable solutions (and especially the high-efficiency
solutions) by specially modulated input pulses.}
}

@article{MutapcicBo09,
author = {Almir Mutapcic and Stephen Boyd and Ardavan Farjadpour and Steven G. Johnson and Yehuda Avniel},
title = {Robust design of slow-light tapers in periodic waveguides},
journal = {Engineering Optimization},
volume = 41,
pages = {365--384},
month = {April},
year = 2009,
doi = {10.1080/03052150802576797},
url = {http://web.stanford.edu/~boyd/papers/robust_taper.html},
abstract = {This article concerns the design of tapers for coupling power between uniform and slow-light periodic waveguides. New optimization methods are described for designing robust tapers, which not only perform well under nominal conditions, but also over a given set of parameter variations. When the set of parameter variations models the inevitable variations typical in the manufacture or operation of the coupler, a robust design is one that will have a high yield, despite these parameter variations. The ideas of successive refinement, and robust optimization based on multi-scenario optimization with iterative sampling of uncertain parameters, using a fast method for approximately evaluating the reflection coefficient, are introduced. Robust design results are compared to a linear taper, and to optimized tapers that do not take parameter variation into account. Finally, robust performance of the resulting designs is verified using an accurate, but much more expensive, method for evaluating the reflection coefficient.}
}

@article{HamamIb09,
author = {Rafif E. Hamam and Mihai Ibanescu and Steven G. Johnson and J. D. Joannopoulos and Marin Solja{\v{c}}i{\'{c}}},
title = {Broadband super-collimation in a hybrid photonic crystal structure},
journal = {Optics Express},
year = 2009,
volume = 17,
pages = {8109--8118},
month = {April},
url = {http://www.opticsinfobase.org/oe/abstract.cfm?URI=oe-17-10-8109},
doi = {10.1364/OE.17.008109},
abstract = {We propose a two dimensional (2D) photonic crystal (PhC) structure that supports super-collimation over a large frequency range (over 4 times that of a traditional square lattice of holes). We theoretically and numerically investigate the collimation mechanism in our 2D structure, in comparison to that of two other frequently used related PhC structures. We also point out the potential importance of our proposed structure in the design of super-collimation-based devices for both monochromatic and polychromatic light.}
}

@article{BurgessRo09,
author = {Ian B. Burgess and Alejandro W. Rodriguez and Murray W. McCutcheon and Jorge Bravo-Abad and Yinan Zhang and Steven G. Johnson and Marko Lon{\v{c}}ar},
title = {Difference-frequency generation with quantum-limited efficiency in triply-resonant nonlinear cavities},
journal = {Optics Express},
year = 2009,
month = {May},
volume = 17,
pages = {9241--9251},
url = {http://www.opticsinfobase.org/oe/abstract.cfm?URI=oe-17-11-9241},
doi = {10.1364/OE.17.009241},
abstract = {We present a comprehensive study of second-order nonlinear difference frequency generation in triply resonant cavities using a theoretical framework based on coupled-mode theory. We show that optimal quantum-limited conversion efficiency can be achieved at any pump power when the powers at the pump and idler frequencies satisfy a critical relationship. We demonstrate the existence of a broad parameter range in which all triply-resonant DFG processes exhibit monostable conversion. We also demonstrate the existence of a geometry-dependent bistable region.}
}

@article{OskooiJo09,
author = {Ardavan F. Oskooi and J. D. Joannopoulos and Steven G. Johnson},
title = {Zero--group-velocity modes in chalcogenide holey photonic-crystal fibers},
journal = {Optics Express},
year = 2009,
volume = 17,
pages = {10082--10090},
month = {June},
url = {http://www.opticsinfobase.org/oe/abstract.cfm?URI=oe-17-12-10082},
doi = {10.1364/OE.17.010082},
abstract = {We demonstrate that a holey photonic-crystal fiber with chalcogenide-glass index contrast can be designed to have a complete gap at a propagation constant $\beta = 0$ that also extends into the non-zero $\beta$ region. This type of bandgap (previously identified only at index contrasts unattainable in glasses) opens up a regime for guiding zero--group-velocity modes not possible in holey fibers with the more common finger-like gaps originating from $\beta\to\infty$. Such modes could be used to enhance nonlinear and other material interactions, such as for hollow-core fibers in gas-sensor applications.}
}

@article{LohOs09,
pdf = {LohOs09.pdf},
author = {Po-Ru Loh and Ardavan F. Oskooi and Mihai Ibanescu and Maksim Skorobogatiy and Steven G. Johnson},
title = {Fundamental relation between phase and group velocity, and application to the failure of perfectly matched layers in backward-wave structures},
journal = {Physical Review~E},
year = 2009,
volume = 79,
pages = {065601(R)},
month = {June},
doi = {10.1103/PhysRevE.79.065601},
abstract = {We demonstrate that the ratio of group to phase velocity has a simple relationship to the orientation of the electromagnetic field. In nondispersive materials, opposite group and phase velocity corresponds to fields that are mostly oriented in the propagation direction. More generally, this relationship (including the case of dispersive and negative-index materials) offers a perspective on the phenomena of backward waves and left-handed media. As an application of this relationship, we demonstrate and explain an irrecoverable failure of perfectly matched layer  absorbing boundaries in computer simulations for constant cross-section waveguides with backward-wave modes and suggest an alternative in the form of adiabatic isotropic absorbers.}
}

@article{GhebrebrhanBe09,
author = {Michael Ghebrebrhan and Peter Bermel and Yehuda Avniel and John D. Joannopoulos and Steven G. Johnson},
title = {Global optimization of silicon photovoltaic cell front coatings},
journal = {Optics Express},
year = 2009,
volume = 17,
pages = {7505--7518},
month = {April},
url = {http://www.opticsinfobase.org/oe/abstract.cfm?URI=oe-17-9-7505},
doi = {10.1364/OE.17.007505},
abstract = {The front-coating (FC) of a solar cell controls its efficiency, determining admission of light into the absorbing material and potentially trapping light to enhance thin absorbers. Single-layer FC designs are well known, especially for thick absorbers where their only purpose is to reduce reflections. Multilayer FCs could improve performance, but require global optimization to design. For narrow bandwidths, one can always achieve nearly 100\% absorption. For the entire solar bandwidth, however, a second FC layer improves performance by 6.1\% for 256~$\mu$m wafer-based cells, or by 3.6\% for 2~$\mu$m thin-film cells, while additional layers yield rapidly diminishing returns.}
}

@article{ReidRo09,
pdf = {ReidRo09.pdf},
author = {M. T. Homer Reid and Alejandro W. Rodriguez and Jacob White and Steven G. Johnson},
title = {Efficient computation of {Casimir} interactions between arbitrary 3d objects},
journal = {Physical Review Letters},
year = 2009,
volume = 103,
month = {July},
pages = {040401},
eprint = {arXiv:0904.0741},
doi = {10.1103/PhysRevLett.103.040401},
abstract = {We introduce an efficient technique for computing Casimir energies and forces between objects of arbitrarily complex 3D geometries. In contrast to other recently developed methods, our technique easily handles non-spheroidal, non-axisymmetric objects and objects with sharp corners. Using our new technique, we obtain the first predictions of Casimir interactions in a number of experimentally relevant geometries, including crossed cylinders and tetrahedral nanoparticles.},
note = {Invited paper in August 3, 2009, issue of the {\it Virtual Journal of Nanoscale Science & Technology}.}
}

@article{QiuHu09,
author = {Chengwei Qiu and Li Hu and Baile Zhang and Bae-Ian Wu and Steven G. Johnson and John D. Joannopoulos},
title = {Spherical cloaking using nonlinear transformations for improved segmentation into concentric isotropic coatings},
journal = {Optics Express},
year = 2009,
volume = 17,
pages = {13467--13478},
month = {July},
url = {http://www.opticsinfobase.org/oe/abstract.cfm?URI=oe-17-16-13467},
doi = {10.1364/OE.17.013467},
abstract = {Two novel classes of spherical invisibility cloaks based on nonlinear transformation have been studied. The cloaking characteristics are presented by segmenting the nonlinear transformation based spherical cloak into concentric isotropic homogeneous coatings. Detailed investigations of the optimal discretization (e.g., thickness control of each layer, nonlinear factor, etc.) are presented for both linear and nonlinear spherical cloaks and their effects on invisibility performance are also discussed. The cloaking properties and our choice of optimal segmentation are verified by the numerical simulation of not only near-field electric-field distribution but also the far-field radar cross section (RCS).}
}

@article{RodriguezMc09-fdtd,
pdf = {RodriguezMc09-fdtd.pdf},
author = {Alejandro W. Rodriguez and Alexander P. McCauley and John D. Joannopoulos and Steven G. Johnson},
title = {{Casimir} forces in the time domain: Theory},
journal = {Physical Review~A},
year = 2009,
volume = 80,
pages = 012115,
month = {July},
doi = {10.1103/PhysRevA.80.012115},
eprint = {arXiv:0904.0267},
abstract = {We present a method to compute Casimir forces in arbitrary geometries and for arbitrary materials based on the finite-difference time-domain (FDTD) scheme. The method involves the time evolution of electric and magnetic fields in response to a set of current sources, in a modified medium with frequency-independent conductivity. The advantage of this approach is that it allows one to exploit existing FDTD software, without modification, to compute Casimir forces. In this paper, we focus on the derivation, implementation choices, and essential properties of the time-domain algorithm, both considered analytically and illustrated in the simplest parallel-plate geometry.}
}

@incollection{JohnsonFr08:burrus,
author = {Steven G. Johnson and Matteo Frigo},
title = {Implementing {FFT}s in Practice},
booktitle = {Fast Fourier Transforms},
publisher = {Connexions},
year = 2008,
editor = {C. Sidney Burrus},
chapter = 11,
address = {Rice University, Houston TX},
month = {September},
url = {http://cnx.org/content/m16336/},
abstract = {Discussion of the considerations involved in high-performance FFT implementations, which center largely on memory access and other non-arithmetic concerns, as illustrated by a case study of the FFTW library.}
}

@article{OskooiKo09,
pdf = {OskooiKo09.pdf},
author = {Ardavan F. Oskooi and Chris Kottke and Steven G. Johnson},
title = {Accurate finite-difference time-domain simulation of anisotropic media by subpixel smoothing},
journal = {Optics Letters},
year = 2009,
volume = 34,
pages = {2778--2780},
month = {September},
url = {http://www.opticsinfobase.org/ol/abstract.cfm?URI=ol-34-18-2778},
doi = {10.1364/OL.34.002778},
abstract = {Finite-difference time-domain methods suffer from reduced accuracy when discretizing discontinuous materials. We previously showed that accuracy can be significantly improved by using subpixel smoothing of the isotropic dielectric function, but only if the smoothing scheme is properly designed. Using recent developments in perturbation theory that were applied to spectral methods, we extend this idea to anisotropic media and demonstrate that the generalized smoothing consistently reduces the errors and even attains second-order convergence with resolution.}
}

@article{BurgessZh09,
author = {Ian B. Burgess and Yinan Zhang and Murray W. McCutcheon and Alejandro W. Rodriguez and Jorge Bravo-Abad and Steven G. Johnson and Marko Lon{\v{c}}ar},
title = {Design of an efficient terahertz source using triply resonant nonlinear photonic crystal cavities},
journal = {Optics Express},
year = 2009,
volume = 17,
number = 22,
pages = {20099--20108},
month = {October},
url = {http://www.opticsinfobase.org/oe/abstract.cfm?URI=oe-17-22-20099},
doi = {10.1364/OE.17.020099},
abstract = {We propose a scheme for efficient cavity-enhanced nonlinear THz generation via difference-frequency generation (DFG) processes using a triply resonant system based on photonic crystal cavities. We show that high nonlinear overlap can be achieved by coupling a THz cavity to a doubly-resonant, dual-polarization near-infrared (e.g. telecom band) photonic-crystal nanobeam cavity, allowing the mixing of three mutually orthogonal fundamental cavity modes through a $\chi^{(2)}$ nonlinearity. We demonstrate through coupled-mode theory that complete depletion of the pump frequency -- i.e., quantum-limited conversion -- We show that the output power at the point of optimal total conversion efficiency is adjustable by varying the mode quality ($Q$) factors.}
}

@article{Zheng09,
author = {Wanhua Zheng and Mingxin Xing and Steven G. Johnson and Wenjun Zhou and Wei Chen and Lianghui Chen},
title = {Integration of a photonic crystal polarization beam splitter and waveguide bend},
journal = {Optics Express},
year = 2009,
volume = 17,
pages = {8657--8668},
month = {May},
url = {http://www.opticsinfobase.org/abstract.cfm?URI=oe-17-10-8657},
doi = {10.1364/OE.17.008657},
abstract = {In this work, we present the design of an integrated photonic-crystal polarization beam splitter (PC-PBS) and a low-loss photonic-crystal $60^\circ$ waveguide bend. Firstly, the modal properties of the PC-PBS and the mechanism of the low-loss waveguide bend are investigated by the two-dimensional finite-difference time-domain (FDTD) method, and then the integration of the two devices is studied. It shows that, although the individual devices perform well separately, the performance of the integrated circuit is poor due to the multi-mode property of the PC-PBS. By introducing deformed airhole structures, a single-mode PC-PBS is proposed, which significantly enhance the performance of the circuit with the extinction ratios remaining above 20dB for both transverse-electric (TE) and transverse-magnetic (TM) polarizations. Both the specific result and the general idea of integration design are promising in the photonic crystal integrated circuits in the future.}
}

@article{OskooiRo10,
pdf = {OskooiRo10.pdf},
author = {Ardavan F. Oskooi and David Roundy and Mihai Ibanescu and Peter Bermel and J. D. Joannopoulos and Steven G. Johnson},
title = {{MEEP}: A flexible free-software package for electromagnetic simulations by the {FDTD} method},
journal = {Computer Physics Communications},
year = 2010,
volume = 181,
pages = {687--702},
month = {January},
doi = {10.1016/j.cpc.2009.11.008},
abstract = {This paper describes Meep, a popular free implementation of the finite-difference time-domain (FDTD) method for simulating electromagnetism. In particular, we focus on aspects of implementing a full-featured FDTD package that go beyond standard textbook descriptions of the algorithm, or ways in which Meep differs from typical FDTD implementations. These include pervasive interpolation and accurate modeling of subpixel features, advanced signal processing, support for nonlinear materials via Padé approximants, and flexible scripting capabilities.}
}

@article{McCauleyRo10-fdtd2,
pdf = {McCauleyRo10-fdtd2.pdf},
author = {Alexander P. McCauley and Alejandro W. Rodriguez and John D. Joannopoulos and Steven G. Johnson},
title = {{Casimir} forces in the time domain: Applications},
journal = {Physical Review~A},
year = 2010,
month = {January},
volume = 81,
pages = 012119,
doi = {10.1103/PhysRevA.81.012119},
eprint = {arXiv:0906.5170},
abstract = {Our previous article [Phys. Rev. A 80, 012115 (2009)] introduced a method to compute Casimir forces in arbitrary geometries and for arbitrary materials that was based on a finite-difference time-domain (FDTD) scheme. In this article, we focus on the efficient implementation of our method for geometries of practical interest and extend our previous proof-of-concept algorithm in one dimension to problems in two and three dimensions, introducing a number of new optimizations. We consider Casimir pistonlike problems with nonmonotonic and monotonic force dependence on sidewall separation, both for previously solved geometries to validate our method and also for new geometries involving magnetic sidewalls and/or cylindrical pistons. We include realistic dielectric materials to calculate the force between suspended silicon waveguides or on a suspended membrane with periodic grooves, also demonstrating the application of perfectly matched layer (PML) absorbing boundaries and/or periodic boundaries. In addition, we apply this method to a realizable three-dimensional system in which a silica sphere is stably suspended in a fluid above an indented metallic substrate. More generally, the method allows off-the-shelf FDTD software, already supporting a wide variety of materials (including dielectric, magnetic, and even anisotropic materials) and boundary conditions, to be exploited for the Casimir problem.}
}

@article{AbadRo10,
author = {Jorge Bravo-Abad and Alejandro W. Rodriguez and John D. Joannopoulos and Peter T. Rakich and Steven G. Johnson and Marin Solja{\v{c}}i{\'{c}}},
title = {Efficient low-power terahertz generation via on-chip triply-resonant nonlinear frequency mixing},
journal = {Applied Physics Letters},
year = 2010,
volume = 96,
pages = 101110,
month = {March},
doi = {10.1063/1.3359429},
abstract = {In this letter, we show theoretically how the light-confining properties of triply-resonant photonic resonators can be tailored to enable dramatic enhancements of the conversion efficiency of terahertz (THz) generation via nonlinear frequency down-conversion processes. Using detailed numerical calculations, we predict that this approach can be used to reduce up to three orders of magnitude the pump powers required to reach quantum-limited conversion efficiency of THz generation in conventional nonlinear optical material systems. Furthermore, we propose a realistic design readily accessible experimentally, both for fabrication and demonstration of optimal THz conversion efficiency at sub-W power levels.}
}

@article{RodriguezMc10-clusters,
pdf = {RodriguezMc10-clusters.pdf},
author = {Alejandro W. Rodriguez and Alexander P. McCauley and David Woolf and Federico Capasso and John D. Joannopoulos and Steven G. Johnson},
title = {Non-touching nanoparticle diclusters bound by repulsive and attractive {Casimir} forces},
journal = {Physical Review Letters},
year = 2010,
volume = 104,
pages = 160402,
month = {April},
eprint = {arXiv:0912.2243},
doi = {10.1103/PhysRevLett.104.160402},
abstract = {We present a scheme for obtaining stable Casimir suspension of dielectric nontouching objects immersed in a fluid, validated here in various geometries consisting of ethanol-separated dielectric spheres and semi-infinite slabs. Stability is induced by the dispersion properties of real dielectric (monolithic) materials. A consequence of this effect is the possibility of stable configurations (clusters) of compact objects, which we illustrate via a molecular two-sphere dicluster geometry consisting of two bound spheres levitated above a gold slab. Our calculations also reveal a strong interplay between material and geometric dispersion, and this is exemplified by the qualitatively different stability behavior observed in planar versus spherical geometries.}
}

@article{ParzygnatLe10,
pdf = {ParzygnatLe10.pdf},
author = {Arthur Parzygnat and Karen K. Y. Lee and Yehuda Avniel and Steven G. Johnson},
title = {Sufficient conditions for two-dimensional localization by arbitrarily weak defects in periodic potentials with band gaps},
journal = {Physical Review~B},
year = 2010,
volume = 81,
pages = 155324,
month = {April},
eprint = {arXiv:1002.4426},
doi = {10.1103/PhysRevB.81.155324},
abstract = {We prove, via an elementary variational method, 1d and 2d localization within the band gaps of a periodic Schr\"odinger operator for any mostly negative or mostly positive defect potential, $V$, whose depth is not too great compared to the size of the gap. In a similar way, we also prove sufficient conditions for 1d and 2d localization below the ground state of such an operator. Furthermore, we extend our results to 1d and 2d localization in $d$ dimensions; for example, a linear or planar defect in a 3d crystal. For the case of $D$-fold degenerate band edges, we also give sufficient conditions for localization of up to $D$ states.}
}

@article{RodriguezMc09-analog,
pdf = {RodriguezMc09-analog.pdf},
author = {Alejandro W. Rodriguez and Alexander P. McCauley and John D. Joannopoulos and Steven G. Johnson},
title = {Theoretical ingredients of a {Casimir} analog computer},
journal = {Proceedings of the National Academy of Sciences},
year = 2010,
volume = 107,
pages = {9531--9536},
month = {May},
eprint = {arXiv:0903.0599},
doi = {10.1073/pnas.1003894107},
abstract = {We derive a correspondence between the contour integration of the Casimir stress tensor in the complex-frequency plane and the electromagnetic response of a physical dissipative medium in a finite real-frequency bandwidth. The consequences of this correspondence are at least threefold: First, the correspondence makes it easier to understand Casimir systems from the perspective of conventional classical electromagnetism, based on real-frequency responses, in contrast to the standard imaginary-frequency point of view based on Wick rotations. Second, it forms the starting point of finite-difference time-domain numerical techniques for calculation of Casimir forces in arbitrary geometries. Finally, this correspondence is also key to a technique for computing quantum Casimir forces at micrometer scales using antenna measurements at tabletop (e.g., centimeter) scales, forming a type of analog computer for the Casimir force. Superficially, relationships between the Casimir force and the classical electromagnetic Green’s function are well known, so one might expect that any experimental measurement of the Green’s function would suffice to calculate the Casimir force. However, we show that the standard forms of this relationship lead to infeasible experiments involving infinite bandwidth or exponentially growing fields, and a fundamentally different formulation is therefore required.}
}

@article{LeeNy10,
author = {Ka Yan Karen Lee and Michelle K. Nyein and David F. Moore and J. D. Joannopoulos and Simona Socrate and Timothy Imholt and Raul Radovitzky and Steven G. Johnson},
title = {Blast-induced electromagnetic fields in the brain from bone piezoelectricity},
journal = {NeuroImage},
year = 2011,
volume = 54,
pages = {S30--S36},
month = {January},
note = {Invited paper, published online June 2010.},
doi = {10.1016/j.neuroimage.2010.05.042},
abstract = {In this paper, we show that bone piezoelectricity---a phenomenon in which bone polarizes electrically in response to an applied mechanical stress and produces a short-range electric field---may be a source of intense blast-induced electric fields in the brain, with magnitudes and timescales comparable to fields with known neurological effects. We compute the induced charge density in the skull from stress data on the skull from a finite-element full-head model simulation of a typical IED-scale blast wave incident on an unhelmeted human head as well as a human head protected by a kevlar helmet, and estimate the resulting electric fields in the brain in both cases to be on the order of 10 V/m in millisecond pulses. These fields are more than 10 times stronger than the IEEE safety guidelines for controlled environments (IEEE Standards Coordinating Committee 28, 2002) and comparable in strength and timescale to fields from repetitive Transcranial Magnetic Stimulation (rTMS) that are designed to induce neurological effects (Wagner et al., 2006a). They can be easily measured by RF antennas, and may provide the means to design a diagnostic tool that records a quantitative measure of the head's exposure to blast insult.}
}

@article{HashemiZh10,
pdf = {HashemiZh10.pdf},
author = {Hila Hashemi and Baile Zhang and J. D. Joannopoulos and Steven G. Johnson},
title = {Delay-bandwidth and delay-loss limitations for cloaking of large objects},
journal = {Physical Review Letters},
volume = 104,
year = 2010,
month = {June},
pages = {253903},
eprint = {arXiv:1003.5934},
doi = {10.1103/PhysRevLett.104.253903},
abstract = {We show that the difficulty of cloaking is fundamentally limited by delay-loss and delay-bandwidth limitations that worsen as the size of the object to be cloaked increases relative to the wavelength, using a simple model of ground-plane cloaking. These limitations must be considered when scaling experimental cloaking demonstrations up from wavelength-scale objects.}
}

@article{RodriguezWo10-T,
pdf = {RodriguezWo10-T.pdf},
author = {Alejandro W. Rodriguez and David Woolf and Alexander P. McCauley and Federico Capasso and John D. Joannopoulos and Steven G. Johnson},
title = {Achieving a strongly temperature-dependent {Casimir} effect},
journal = {Physical Review Letters},
volume = 105,
year = 2010,
eprint = {arXiv:1004.2733},
month = {August},
pages = {060401},
doi = {10.1103/PhysRevLett.105.060401},
abstract = {We propose a method of achieving large temperature $T$  sensitivity in the Casimir force that involves measuring the stable separation between dielectric objects immersed in a fluid. We study the Casimir force between slabs and spheres using realistic material models, and find large $>2$~nm/K  variations in their stable separations (hundreds of nanometers) near room temperature. In addition, we analyze the effects of Brownian motion on suspended objects, and show that the average separation is also sensitive to changes in $T$. Finally, this approach also leads to rich qualitative phenomena, such as irreversible transitions, from suspension to stiction, as $T$ is varied.}
}

@article{BermelGh10,
pdf = {BermelGh10.pdf},
author = {Peter Bermel and Michael Ghebrebrhan and Walker Chan and Yi Xiang Yeng and Mohammad Araghchini and Rafif Hamam and Christopher H. Marton and Klavs F. Jensen and Marin Solja{\v{c}}i{\'{c}} and John D. Joannopoulos and Steven G. Johnson and Ivan Celanovic},
title = {Design and global optimization of high-efficiency thermophotovoltaic systems},
journal = {Optics Express},
year = 2010,
month = {August},
volume = 18,
pages = {A314--A334},
url = {http://www.opticsinfobase.org/oe/abstract.cfm?URI=oe-18-S3-A314},
doi = {10.1364/OE.18.00A314},
abstract = {Despite their great promise, small experimental thermophotovoltaic (TPV) systems at 1000 K generally exhibit extremely low power conversion efficiencies (approximately 1\%), due to heat losses such as thermal emission of undesirable mid-wavelength infrared radiation. Photonic crystals (PhC) have the potential to strongly suppress such losses. However, PhC-based designs present a set of non-convex optimization problems requiring efficient objective function evaluation and global optimization algorithms. Both are applied to two example systems: improved micro-TPV generators and solar thermal TPV systems. Micro-TPV reactors experience up to a 27-fold increase in their efficiency and power output; solar thermal TPV systems see an even greater 45-fold increase in their efficiency (exceeding the Shockley–Quiesser limit for a single-junction photovoltaic cell).}
}

@article{LevinMc10,
pdf = {LevinMc10.pdf},
author = {Michael Levin and Alexander P. McCauley and Alejandro W. Rodriguez and M. T. Homer Reid and Steven G. Johnson},
title = {Casimir repulsion between metallic objects in vacuum},
journal = {Physical Review Letters},
volume = 105,
pages = {090403},
year = 2010,
month = {August},
doi = {10.1103/PhysRevLett.105.090403},
eprint = {arXiv:1003.3487},
abstract = {We give an example of a geometry in which two metallic objects in vacuum experience a repulsive Casimir force. The geometry consists of an elongated metal particle centered above a metal plate with a hole. We prove that this geometry has a repulsive regime using a symmetry argument and confirm it with numerical calculations for both perfect and realistic metals. The system does not support stable levitation, as the particle is unstable to displacements away from the symmetry axis.}
}

@article{McCauleyZh10,
pdf = {McCauleyZh10.pdf},
author = {Alexander P. McCauley and Rongkuo Zhao and M. T. Homer Reid and Alejandro W. Rodriguez and Jiangfeng Zhou and F. S. S. Rosa and John D. Joannopoulos and D. A. R. Dalvit and Costas M. Soukoulis and Steven G. Johnson},
title = {Microstructure effects for {Casimir} forces in chiral metamaterials},
journal = {Physical Review~B},
year = 2010,
volume = 82,
pages = 165108,
month = {October},
eprint = {arXiv:1006.5489},
doi = {10.1103/PhysRevB.82.165108},
abstract = {We examine a recent prediction for the chirality dependence of the Casimir force in chiral metamaterials by numerical computation of the forces between the exact microstructures, rather than homogeneous approximations. Although repulsion in the metamaterial regime is rigorously impossible, it is unknown whether a reduction in the attractive force can be achieved through suitable material engineering. We compute the exact force for a chiral bent-cross pattern, as well as forces for an idealized omega''-particle medium in the dilute approximation and identify the effects of structural inhomogeneity (i.e., proximity forces and anisotropy). We find that these microstructure effects dominate the force for separations where chirality was predicted to have a strong influence. At separations where the homogeneous approximation is valid, in even the most ideal circumstances the effects of chirality are less than $10^{−4}$ of the total force, making them virtually undetectable in experiments.}
}

@article{RodriguezMc11-bonding,
author = {Alejandro W. Rodriguez and Alexander P. McCauley and Pui-Chuen Hui and David Woolf and Eiji Iwase and Federico Capasso and Marko Lon{\v{c}}ar and Steven G. Johnson},
title = {Bonding, antibonding and tunable optical forces in asymmetric membranes},
journal = {Optics Express},
year = 2011,
volume = 19,
pages = {2225--2241},
month = {January},
eprint = {arXiv:1012.1009},
url = {http://www.opticsinfobase.org/oe/abstract.cfm?URI=oe-19-3-2225},
doi = {10.1364/OE.19.002225},
abstract = {We demonstrate that tunable attractive (bonding) and repulsive (anti-bonding) forces can arise in highly asymmetric structures coupled to external radiation, a consequence of the bonding/anti-bonding level repulsion of guided-wave resonances that was first predicted in symmetric systems. Our focus is a geometry consisting of a photonic-crystal (holey) membrane suspended above an unpatterned layered substrate, supporting planar waveguide modes that can couple via the periodic modulation of the holey membrane. Asymmetric geometries have a clear advantage in ease of fabrication and experimental characterization compared to symmetric double-membrane structures. We show that the asymmetry can also lead to unusual behavior in the force magnitudes of a bonding/antibonding pair as the membrane separation changes, including nonmonotonic dependences on the separation. We propose a computational method that obtains the entire force spectrum via a single time-domain simulation, by Fourier-transforming the response to a short pulse and thereby obtaining the frequency-dependent stress tensor. We point out that by operating with two, instead of a single frequency, these evanescent forces can be exploited to tune the spring constant of the membrane without changing its equilibrium separation.}
}

@article{OskooiJo11,
pdf = {OskooiJo11.pdf},
author = {Ardavan Oskooi and Steven G. Johnson},
title = {Distinguishing correct from incorrect {PML} proposals and a corrected unsplit {PML} for anisotropic, dispersive media},
journal = {Journal of Computational Physics},
year = 2011,
volume = 230,
pages = {2369--2377},
month = {April},
doi = {10.1016/j.jcp.2011.01.006},
abstract = {We show that some previous proposals for perfectly matched layer (PML) absorbers in anisotropic media or for waveguides at oblique incidence are not, in fact true PMLs; in previous work we similarly showed a failure of several PML proposals for periodic media (photonic crystals). We therefore argue that a more careful validation scheme is required for PML proposals, in contrast to past authors who have typically checked only that reflections are small for a fixed resolution, and suggest a simple validation scheme that can be readily applied to any PML proposal regardless of derivation or implementation. We demonstrate this test for a corrected, unsplit-field PML valid for anisotropic, dispersive media, implemented in both planewave-expansion and finite-difference time-domain (FDTD) methods.}
}

@article{RamirezRo11,
pdf = {RamirezRo11.pdf},
author = {David Ramirez and Alejandro W. Rodriguez and Hila Hashemi and J.D. Joannopoulos and Marin Solja{\v{c}}i{\'{c}} and Steven G. Johnson},
title = {Degenerate four-wave mixing in triply-resonant {Kerr} cavities},
journal = {Physical Review~A},
year = 2011,
volume = 83,
pages = {033834},
eprint = {arXiv:1011.5845},
month = {March},
doi = {10.1103/PhysRevA.83.033834},
abstract = {We demonstrate theoretical conditions for highly-efficient degenerate four-wave mixing in triply-resonant nonlinear (Kerr) cavities. We employ a general and accurate temporal coupled-mode analysis in which the interaction of light in arbitrary microcavities is expressed in terms a set of coupling coefficients that we rigorously derive from the full Maxwell equations. Using the coupled-mode theory, we show that light consisting of an input signal of frequency $\omega_0-\Delta \omega$ can, in the presence of pump light at $\omega_0$, be converted with quantum-limited efficiency into an output shifted signal of frequency $\omega_0 + \Delta \omega$, and we derive expressions for the critical input powers at which this occurs. We find that critical powers in the order of 10mW assuming very conservative cavity parameters (modal volumes $\sim 10$ cubic wavelengths and quality factors $\sim 1000$. The standard Manley-Rowe efficiency limits are obtained from the solution of the classical coupled-mode equations, although we also derive them from simple photon-counting quantum'' arguments. Finally, using a linear stability analysis, we demonstrate that maximal conversion efficiency can be retained even in the presence of self- and cross-phase modulation effects that generally act to disrupt the resonance condition. }
}

@article{RodriguezCa11,
author = {Alejandro W. Rodriguez and Federico Capasso and Steven G. Johnson},
title = {The {Casimir} effect in microstructured geometries},
journal = {Nature Photonics},
year = 2011,
volume = 5,
pages = {211--221},
month = {March},
note = {Invited review.},
doi = {10.1038/nphoton.2011.39},
abstract = {In 1948, Hendrik Casimir predicted that a generalized version of van der Waals forces would arise between two metal plates due to quantum fluctuations of the electromagnetic field. These forces become significant in micromechanical systems at submicrometre scales, such as in the adhesion between movable parts. The Casimir force, through a close connection to classical photonics, can depend strongly on the shapes and compositions of the objects, stimulating a decades-long search for geometries in which the force behaves very differently from the monotonic attractive force first predicted by Casimir. Recent theoretical and experimental developments have led to a new understanding of the force in complex microstructured geometries, including through recent theoretical predictions of Casimir repulsion between vacuum-separated metals, the stable suspension of objects and unusual non-additive and temperature effects, as well as experimental observations of repulsion in fluids, non-additive forces in nanotrench surfaces and the influence of new material choices.}
}

@article{VarelaRo11,
pdf = {VarelaRo11.pdf},
author = {Jaime Varela and Alejandro W. Rodriguez and Alexander P. McCauley and Steven G. Johnson},
title = {Casimir micro-sphere diclusters and three-body effects in fluids},
journal = {Physical Review~A},
volume = 83,
pages = 042516,
year = 2011,
eprint = {arXiv:1012.0860},
month = {April},
doi = {10.1103/PhysRevA.83.042516},
abstract = {Our previous article [Phys. Rev. Lett. 104, 060401 (2010)] predicted that Casimir forces induced by the material-dispersion properties of certain dielectrics can give rise to stable configurations of objects. This phenomenon was illustrated via a dicluster configuration of non-touching objects consisting of two spheres immersed in a fluid and suspended against gravity above a plate. Here, we examine these predictions from the perspective of a practical experiment and consider the influence of non-additive, three-body, and nonzero-temperature effects on the stability of the two spheres. We conclude that the presence of Brownian motion reduces the set of experimentally realizable silicon/teflon spherical diclusters to those consisting of layered micro-spheres, such as the hollow core (spherical shells) considered here.}
}

@article{PanMc11,
pdf = {PanMc11.pdf},
author = {Kai Pan and Alexander P. McCauley and Alejandro W. Rodriguez and M. T. Homer Reid and Jacob K. White and Steven G. Johnson},
title = {Calculation of nonzero-temperature {Casimir} forces in the time domain},
journal = {Physical Review~A},
year = 2011,
volume = 83,
pages = {040503(R)},
eprint = {arXiv:1011.4727},
month = {April},
doi = {10.1103/PhysRevA.83.040503},
abstract = {We show how to compute Casimir forces at nonzero temperatures with time-domain electromagnetic simulations, for example using a finite-difference time-domain (FDTD) method. Compared to our previous zero-temperature time-domain method, only a small modification is required, but we explain that some care is required to properly capture the zero-frequency contribution. We validate the method against analytical and numerical frequency-domain calculations, and show a surprising high-temperature disappearance of a non-monotonic behavior previously demonstrated in a pistonlike geometry.}
}

@article{KursKe11,
pdf = {KursKe11.pdf},
author = {Andr{\'{e}} Kurs and Morris Kesler and Steven G. Johnson},
title = {Optimized design of a low-resistance electrical conductor for the multimegahertz range},
journal = {Applied Physics Letters},
year = 2011,
volume = 98,
number = 17,
pages = 172504,
month = {April},
doi = {10.1063/1.3569141},
abstract = {We propose a design for a conductive wire composed of several mutually insulated coaxial conducting shells. With the help of numerical optimization, it is possible to obtain electrical resistances significantly lower than those of a heavy-gauge copper wire or litz wire in the 2-–20 MHz range. Moreover, much of the reduction in resistance can be achieved for just a few shells; in contrast, litz wire would need to contain $\sim 10^4$ strands to perform comparably in this frequency range.}
}

@article{McCauleyRo11,
pdf = {McCauleyRo11.pdf},
author = {Alexander P. McCauley and F. S. S. Rosa and Alejandro W. Rodriguez and John D. Joannopoulos and D. A. R. Dalvit and Steven G. Johnson},
title = {Structural anisotropy and orientation-induced {Casimir} repulsion in fluids},
journal = {Physical Review~A},
volume = 83,
pages = 052503,
year = 2011,
eprint = {arXiv:1009.4508},
month = {May},
doi = {10.1103/PhysRevA.83.052503},
abstract = {In this work we theoretically consider the Casimir force between two periodic arrays of nanowires (both in vacuum, and on a substrate separated by a fluid) at separations comparable to the period. Specifically, we compute the dependence of the exact Casimir force between the arrays under both lateral translations and rotations. Although typically the force between such structures is well characterized by the proximity force approximation (PFA), we find that in the present case the microstructure modulates the force in a way qualitatively inconsistent with PFA. We find instead that effective-medium theory, in which the slabs are treated as homogeneous, anisotropic dielectrics, gives a surprisingly accurate picture of the force, down to separations of half the period. This includes a situation for identical, fluid-separated slabs in which the exact force changes sign with the orientation of the wire arrays, whereas PFA predicts attraction. We discuss the possibility of detecting these effects in experiments, concluding that this effect is strong enough to make detection possible in the near future.}
}

@article{RodriguezWo11,
pdf = {RodriguezWo11.pdf},
author = {Alejandro W. Rodriguez and David Woolf and Pui-Chuen Hui and Eiji Iwase and Alexander P. McCauley and Federico Capasso and Marko Lon{\v{c}}ar and and Steven G. Johnson},
title = {Designing evanescent optical interactions to control the expression of {Casimir} forces in optomechanical structures },
journal = {Applied Physics Letters},
year = 2011,
volume = 98,
pages = 194105,
month = {May},
doi = {10.1063/1.3589119},
abstract = {We propose an optomechanical structure consisting of a photonic-crystal (holey) membrane suspended above a layered silicon-on-insulator substrate in which resonant bonding/antibonding optical forces created by externally incident light from above enable all-optical control and actuation of stiction effects induced by the Casimir force. In this way, one can control how the Casimir force is expressed in the mechanical dynamics of the membrane, not by changing the Casimir force directly but by optically modifying the geometry and counteracting the mechanical spring constant to bring the system in or out of regimes where Casimir physics dominate. The same optical response (reflection spectrum) of the membrane to the incident light can be exploited to accurately measure the effects of the Casimir force on the equilibrium separation of the membrane.},
note = {Invited paper in May 23, 2011, issue of the {\it Virtual Journal of Nanoscale Science & Technology}.}
}

@article{ShengJo11,
pdf = {ShengJo11.pdf},
author = {Xing Sheng and Steven G. Johnson and Jurgen Michel and Lionel C. Kimerling},
title = {Optimization-based design of surface textures for thin-film {Si} solar cells},
journal = {Optics Express},
year = 2011,
volume = 19,
pages = {A841--A850},
month = {June},
doi = {10.1364/OE.19.00A841},
abstract = {We numerically investigate the light-absorption behavior of thin-film silicon for normal-incident light, using surface textures to enhance absorption. We consider a variety of texture designs, such as simple periodic gratings and commercial random textures, and examine arbitrary irregular periodic textures designed by multi-parameter optimization. Deep and high-index-contrast textures exhibit strong anisotropic scattering that is outside the regime of validity of the Lambertian models commonly used to describe texture-induced absorption enhancement for normal incidence. Over a 900–1100 nm wavelength range, our optimized surface texture in two dimensions (2D) enhances absorption by a factor of $2.7\pi n$, considerably larger than the original πn Lambertian result and exceeding by almost 50\% a recent generalization of Lambertian model for periodic structures in finite spectral range. However, the $\pi n$ Lambertian limit still applies for isotropic incident light, and our structure obeys this limit when averaged over all the angles. Therefore, our design can be thought of optimizing the angle/enhancement tradeoff for periodic textures.}
}

@article{KursJo11,
author = {Andr{\'{e}} Kurs and John D. Joannopoulous and Marin Solja{\v{c}}i{\'{c}} and Steven G. Johnson},
title = {Abrupt coupling between strongly dissimilar waveguides with 100\% transmission},
journal = {Optics Express},
year = 2011,
volume = 19,
pages = {13714--13721},
month = {June},
url = {http://www.opticsinfobase.org/oe/abstract.cfm?URI=oe-19-14-13714},
doi = {10.1364/OE.19.013714},
abstract = {We present numerical experiments showing how coupled-mode theory can be systematically applied to join very dissimilar photonic crystal waveguides with 100\% transmission. Our approach relies on appropriately tuning the coupling of the evanescent tail of a cavity mode to each waveguide. The transition region between the waveguides may be as short as a few lattice spacings. Moreover, this technique only requires varying a small number of parameters (two for each waveguide in our example) and the tuning to each waveguide may be done separately, greatly simplifying the computations involved.}
}

@article{DengNa10,
author = {D. S. Deng and J.-C. Nave and X. Liang and S. G. Johnson and Y. Fink},
title = {Exploration of in-fiber nanostructures from capillary instability},
journal = {Optics Express},
volume = 17,
pages = {16273--16290},
year = 2011,
month = {August},
url = {http://www.opticsinfobase.org/oe/abstract.cfm?URI=oe-19-17-16273},
doi = {10.1364/OE.19.016273},
abstract = {A new class of multi-material fiber that incorporates micrometer-thickness concentric-cylindrical sheets of glass into polymer matrix has emerged. The ultimate lower limit of feature size and recent observation of interesting instability phenomenon in fiber system motivate us to examine fluid instabilities during the complicated thermal drawing fabrication processing. In this paper, from the perspective of a single instability mechanism, classical Plateau-Rayleigh instabilities in the form of radial fluctuation, we explore the stability of various microstructures (such as shells and filaments) in our composite fibers. The attained uniform structures are consistent with theoretical analysis. Furthermore, a viscous materials map is established from calculations and agrees well with various identified materials. These results not only shed insights into other forms of fluid instabilities, but also provide guidance to achieve more diverse nanostructures (such as filaments, wires, and particles) in the microstructured fibers.}
}

@article{HashemiOs11,
pdf = {HashemiOs11.pdf},
author = {Hila Hashemi and A. Oskooi and J. D. Joannopoulos and Steven G. Johnson},
title = {General scaling limitations of ground-plane and isolated-object cloaks},
journal = {Physical Review~A},
volume = 84,
pages = 023815,
year = 2011,
eprint = {arXiv:1102.3897},
doi = {10.1103/PhysRevA.84.023815},
month = {August},
abstract = {We prove that, for arbitrary three-dimensional transformation-based invisibility cloaking of an object above a ground plane or of isolated object, there are practical constraints that increase with the object size. In particular, we show that the cloak thickness must scale proportional to the thickness of the object being cloaked, assuming bounded refractive indices, and that absorption discrepancies and other imperfections must scale inversely with the object thickness. For isolated objects, we also show that bounded refractive indices imply a lower bound on the effective cross-section.}
}

@article{LevinJo11,
pdf = {LevinJo11.pdf},
author = {Michael Levin and Steven G. Johnson},
title = {Is the electrostatic force between a point charge and a neutral metallic object always attractive?},
journal = {American Journal of Physics},
year = 2011,
volume = 79,
pages = {843--849},
eprint = {arXiv:1007.2175},
month = {August},
doi = {10.1119/1.3595554},
abstract = {We give an example of a geometry in which the electrostatic force between a point charge and a neutral metallic object is repulsive. The example consists of a point charge centered above a thin metallic hemisphere, positioned concave up. We show that this geometry has a repulsive regime using both a simple analytical argument and an exact calculation for an analogous two-dimensional geometry. Analogues of this geometry-induced repulsion can appear in many other contexts, including Casimir systems.}
}

@article{LiangDe11,
pdf = {LiangDe11.pdf},
author = {X. Liang and D. S. Deng and J.-C. Nave and Steven G. Johnson},
title = {Linear stability analysis of capillary instabilities for concentric cylindrical shells},
journal = {Journal of Fluid Mechanics},
year = 2011,
volume = 683,
pages = {235--262},
doi = {10.1017/jfm.2011.260},
eprint = {arXiv:1009.5139},
month = {August},
abstract = {Motivated by complex multi-fluid geometries currently being explored in fibre-device manufacturing, we study capillary instabilities in concentric cylindrical flows of $N$ fluids with arbitrary viscosities, thicknesses, densities, and surface tensions in both the Stokes regime and for the full Navier--Stokes problem. Generalising previous work by Tomotika ($N=2$), Stone & Brenner ($N=3$, equal viscosities) and others, we present a full linear stability analysis of the growth modes and rates, reducing the system to a linear generalised eigenproblem in the Stokes case. Furthermore, we demonstrate by Plateau-style geometrical arguments that only axisymmetric instabilities need be considered. We show that the $N=3$ case is already sufficient to obtain several interesting phenomena: limiting cases of thin shells or low shell viscosity that reduce to $N=2$ problems, and a system with competing breakup processes at very different length scales. The latter is demonstrated with full 3-dimensional simulations. Many $N > 3$ cases remain to be explored, and as a first step we discuss two illustrative $N \to \infty$ cases, an alternating-layer structure and a geometry with a continuously varying viscosity.}
}

@article{ReidWh11-3d,
pdf = {ReidWh11-3d.pdf},
author = {M. T. Homer Reid and Jacob White and Steven G. Johnson},
title = {Computation of {Casimir} interactions between arbitrary three-dimensional objects with arbitrary material properties},
journal = {Physical Review~A},
volume = 84,
pages = {010503(R)},
year = 2011,
eprint = {arXiv:1010.5539},
month = {July},
doi = {10.1103/PhysRevA.84.010503},
abstract = {We extend a recently introduced method for computing Casimir forces between arbitrarily shaped metallic objects [M. T. H. Reid {\it et al.}, Phys. Rev. Lett.~{\bf 103} 040401 (2009)] to allow treatment of objects with arbitrary material properties, including imperfect conductors, dielectrics, and magnetic materials. Our original method considered electric currents on the surfaces of the interacting objects; the extended method considers both electric \emph{and magnetic} surface current distributions, and obtains the Casimir energy of a configuration of objects in terms of the interactions of these effective surface currents. Using this new technique, we present the first predictions of Casimir interactions in several experimentally relevant geometries that would be difficult to treat with any existing method. In particular, we investigate Casimir interactions between dielectric nanodisks embedded in a dielectric fluid; we identify the threshold surface--surface separation at which finite-size effects become relevant, and we map the rotational energy landscape of bound nanoparticle diclusters.}
}

@article{RodriguezIl11,
pdf = {RodriguezIl11.pdf},
author = {Alejandro W. Rodriguez and Ognjen Ilic and Peter Bermel and Ivan Celanovic and John D. Joannopoulos and Marin Solja{\v{c}}i{\'{c}} and Steven G. Johnson},
title = {Frequency-selective near-field radiative heat transfer between photonic crystal slabs: A computational approach for arbitrary geometries and materials},
journal = {Physical Review Letters},
year = 2011,
volume = 107,
pages = {114302},
eprint = {arXiv:1105.0708},
month = {September},
doi = {10.1103/PhysRevLett.107.114302},
abstract = {We demonstrate the possibility of achieving enhanced frequency-selective near-field radiative heat transfer between patterned (photonic-crystal) slabs at designable frequencies and separations, exploiting a general numerical approach for computing heat transfer in arbitrary geometries and materials based on the finite-difference time-domain method. Our simulations reveal a tradeoff between selectivity and near-field enhancement as the slab-slab separation decreases, with the patterned heat transfer eventually reducing to the unpatterned result multiplied by a fill factor (described by a standard proximity approximation). We also find that heat transfer can be further enhanced at selective frequencies when the slabs are brought into a glide-symmetric configuration, a consequence of the degeneracies associated with the nonsymmorphic symmetry group.}
}

@article{GaoZh12,
author = {Hanhong Gao and Baile Zhang and Steven G. Johnson and George Barbastathis},
title = {Design of thin-film photonic metamaterial {L}{\"{u}}neburg lens using analytical approach},
journal = {Optics Express},
year = 2012,
volume = 20,
pages = {1617--1628},
month = {January},
url = {http://www.opticsinfobase.org/oe/abstract.cfm?URI=oe-20-2-1617},
doi = {10.1364/OE.20.001617},
abstract = {We design an all–dielectric L{\"{u}}neburg lens as an adiabatic space–variant lattice explicitly accounting for finite film thickness. We describe an all–analytical approach to compensate for the finite height of subwavelength dielectric structures in the pass–band regime. This method calculates the effective refractive index of the infinite–height lattice from effective medium theory, then embeds a medium of the same effective index into a slab waveguide of finite height and uses the waveguide dispersion diagram to calculate a new effective index. The results are compared with the conventional numerical treatment – a direct band diagram calculation, using a modified three–dimensional lattice with the superstrate and substrate included in the cell geometry. We show that the analytical results are in good agreement with the numerical ones, and the performance of the thin–film L{\"{u}}neburg lens is quite different than the estimates obtained assuming infinite height.}
}

@incollection{Johnson11,
pdf = {Johnson11.pdf},
author = {Steven G. Johnson},
title = {Numerical methods for computing {Casimir} interactions},
booktitle = {Casimir Physics},
pages = {175--218},
publisher = {Springer},
year = 2011,
editor = {Diego Dalvit and Peter Milonni and David Roberts and Felipe da Rosa},
volume = 834,
series = {Lecture Notes in Physics},
chapter = 6,
month = {June},
doi = {10.1007/978-3-642-20288-9},
eprint = {arXiv:1007.0966},
abstract = {We review several different approaches for computing Casimir forces and related fluctuation-induced interactions between bodies of arbitrary shapes and materials.  The relationships between this problem and well known computational techniques from classical electromagnetism are emphasized.  We also review the basic principles of standard computational methods, categorizing them according to three criteria---choice of problem, basis, and solution technique---that can be used to classify proposals for the Casimir problem as well.  In this way, mature classical methods can be exploited to model Casimir physics, with a few important modifications.}
}

@article{ZhangLe11,
pdf = {ZhangLe11.pdf},
author = {Lei Zhang and Jung Hoon Lee and Ardavan Oskooi and Amit Hochman and Jacob K. White and Steven G. Johnson},
title = {A novel boundary element method using surface conductive absorbers for full-wave analysis of 3-{D} nanophotonics},
journal = {Journal of Lightwave Technology},
year = 2011,
volume = 29,
number = 7,
pages = {949--959},
eprint = {arXiv:1004.5076},
month = {January},
doi = {10.1109/JLT.2011.2107727},
abstract = {Fast surface integral equation (SIE) methods seem to be ideal for simulating 3-D nanophotonic devices, as such devices generate fields in both the interior device volume and in the infinite exterior domain. SIE methods were originally developed for computing scattering from structures with finite surfaces, and since SIE methods automatically represent the infinite extent of the exterior scattered field, there was no need to develop numerical absorbers. Numerical absorbers are needed when SIE methods are used to simulate nanophotonic devices that process or couple light, to provide nonreflecting termination at the optical ports of such devices. In this paper, we focus on the problem of developing an approach to absorbers that are suitable for port termination, yet preserve the surface-only discretization and the geometry-independent Green's function properties of the SIE methods. Preserving these properties allows the absorber approach to be easily incorporated in commonly used fast solvers. We describe our solution to the absorber problem, that of using a gradually increasing surface conductivity, and show how to include surface conductivity in SIE methods. We also analyze numerical results using our absorber approach to terminate a finite-length rectangular cross section dielectric waveguide. The numerical results demonstrate that our surface-conductivity absorber can easily achieve a reflected power of less than $10^{-7}$, and that the magnitude of the transition reflection is proportional to $1/L^{2d+2}$, where $L$ is the absorber length and $d$ is the order of the differentiability of the surface conductivity function.}
}

@article{ShengJo12,
pdf = {ShengJo12.pdf},
author = {Xing Sheng and Steven G. Johnson and Lirong Z. Broderick and Jurgen Michel and Lionel C. Kimerling},
title = {Integrated photonic structures for light trapping in thin-film {Si} solar cells},
journal = {Applied Physics Letters},
year = 2012,
volume = 100,
pages = 111110,
month = {March},
doi = {10.1063/1.3693613},
abstract = {We explore the mechanisms for an efficient light trapping structure for thin-film silicon solar cells. The design combines a distributed Bragg reflector (DBR) and periodic gratings. Using photonic band theories and numerical simulations, we discover that light can be scattered into the DBR by gratings, with an unusual way of light trapping different from metal reflectors and photonic crystals. We further investigate the influence of DBR on generated photocurrent in different device configurations. These results would provide new design rules for photonic structures in thin-film solar cells.}
}

@article{BiRo12,
author = {Zhuan-Fang Bi and Alejandro W. Rodriguez and Hila Hashemi and David Duchesne and Marko Lon{\v{c}}ar and Ke-Ming Wang and Steven G. Johnson},
title = {High-efficiency second-harmonic generation in doubly-resonant $\chi^{(2)}$ microring resonators},
journal = {Optics Express},
year = 2012,
volume = 20,
pages = {7526--7543},
month = {March},
url = {http://www.opticsinfobase.org/oe/abstract.cfm?URI=oe-20-7-7526},
doi = {10.1364/OE.20.007526},
abstract = {By directly simulating Maxwell’s equations via the finite-difference time-domain (FDTD) method, we numerically demonstrate the possibility of achieving high-efficiency second harmonic generation (SHG) in a structure consisting of a microscale doubly-resonant ring resonator side-coupled to two adjacent waveguides. We find that $\geq 94$\% conversion efficiency can be attained at telecom wavelengths, for incident powers in the milliwatts, and for reasonably large bandwidths ($Q \sim 1000$s). We demonstrate that in this high efficiency regime, the system also exhibits limit-cycle or bistable behavior for light incident above a threshold power. Our numerical results agree to within a few percent with the predictions of a simple but rigorous coupled-mode theory framework.}
}

@article{IwaseHui12,
author = {Eiji Iwase and Pui-Chuen Hui and David Woolf and Alejandro W. Rodriguez and Steven G. Johnson and Federico Capasso and Marko Lon{\v{c}}ar},
title = {Control of buckling in large micromembranes using engineered support structures},
journal = {J.~Micromechanics and Microengineering},
year = 2012,
volume = 22,
pages = 065028,
month = {May},
doi = {10.1088/0960-1317/22/6/065028},
abstract = {In this paper we describe a general method to avoid stress-induced buckling of thin and large freestanding membranes. We show that using properly designed supports, in the form of microbeams, we can reduce the out-of-plane deflection of the membrane while maintaining its stiffness. As a proof of principle, we used a silicon-on-insulator (SOI) platform to fabricate 30~$\mu$m wide, 220~nm thick, free-standing Si membranes, supported by four 15~$\mu$m long and 3~$\mu$m wide microbeams. Using our approach, we are able to achieve an out-of-plane deformation of the membrane smaller than 50~nm in spite of 39~MPa of compressive internal stress. Our method is general, and can be applied to different material systems with compressive or tensile internal stress.}
}

@article{McCauleyRe12,
pdf = {McCauleyRe12.pdf},
author = {Alexander P. McCauley and M. T. Homer Reid and Matthias Kr{\"{u}}ger and Steven G. Johnson},
title = {Modeling near-field radiative heat transfer from sharp objects using a general three-dimensional numerical scattering technique},
journal = {Physical Review~B},
year = 2012,
volume = 85,
pages = 165104,
eprint = {arXiv:1107.2111},
month = {April},
doi = {10.1103/PhysRevB.85.165104},
abstract = {We develop a general numerical method to calculate the nonequilibrium radiative heat transfer between a plate and compact objects of arbitrary shapes, making the first accurate theoretical predictions for the total heat transfer and the spatial heat flux profile for three-dimensional compact objects including corners or tips. In contrast to the known sphere-plate heat transfer, we find qualitatively different scaling laws for cylinders and cones at small separations, and, in contrast to a flat or slightly curved object, a sharp cone exhibits a local minimum in the spatially resolved heat flux directly below the tip. Our results may have important implications for near-field thermal writing and surface roughness.}
}

@article{ReidRo-review-eprint,
author = {M. T. Homer Reid and Alejandro W. Rodriguez and Steven G. Johnson},
title = {Fluctuation-Induced Phenomena in Nanoscale Systems: Harnessing the Power of Noise},
journal = {Proceedings of the IEEE},
volume = {100},
year = 2012,
eprint = {arXiv:1207.4222},
month = {July},
doi = {10.1109/JPROC.2012.2191749},
note = {Invited review article.},
abstract = {The famous Johnson--Nyquist formula relating noise current to conductance has a microscopic generalization relating noise current \emph{density} to microscopic \emph{conductivity}, with corollary relations governing noise in the components of the electromagnetic fields. These relations, known collectively in physics as \emph{fluctuation--dissipation} relations, form the basis of the modern understanding of fluctuation-induced phenomena, a field of burgeoning importance in experimental physics and nanotechnology. In this review, we survey recent progress in computational techniques for modeling fluctuation-induced phenomena, focusing on two cases of particular interest: \emph{near-field radiative heat transfer} and \emph{Casimir forces}. In each case we review the basic physics of the phenomenon, discuss semi-analytical and numerical algorithms for theoretical analysis, and present recent predictions for novel phenomena in complex material and geometric configurations.}
}

@article{QiuDeLacy12,
author = {Wenjun Qiu and Brendan G. DeLacy and Steven G. Johnson and John D. Joannopoulos and Marin Solja{\v{c}}i{\'{c}}},
title = {Optimization of broadband optical response of multilayer nanospheres},
journal = {Optics Express},
year = 2012,
volume = 20,
pages = {18494--18504},
month = {July},
doi = {10.1364/OE.20.018494},
abstract = {We propose an optimization-based theoretical approach to tailor the optical response of silver/silica multilayer nanospheres over the visible spectrum. We show that the structure that provides the largest cross-section per volume/mass, averaged over a wide frequency range, is the silver coated silica sphere. We also show how properly chosen mixture of several species of different nanospheres can have an even larger minimal cross-section per volume/mass over the entire visible spectrum.},
note = {Invited paper, {\it Virtual Journal for Biomedical Optics}, vol.~7, issue~9 (28 August 2012).}
}

@article{OskooiMu12,
author = {Ardavan Oskooi and Almir Mutapcic and Susumu Noda and J. D. Joannopoulos and Stephen P. Boyd and Steven G. Johnson},
title = {Robust optimization of adiabatic tapers for coupling to slow-light photonic-crystal waveguides},
journal = {Optics Express},
year = 2012,
volume = 20,
number = 19,
pages = {21558--21575},
month = {September},
url = {http://www.opticsinfobase.org/oe/abstract.cfm?URI=oe-20-19-21558},
doi = {10.1364/OE.20.021558},
abstract = {We investigate the design of taper structures for coupling to slow-light modes of various photonic-crystal waveguides while taking into account parameter uncertainties inherent in practical fabrication. Our short-length (11 periods) robust tapers designed for $\lambda = 1.55\,\mu$m and a slow-light group velocity of $c/34$ have a total loss of $< 20$~dB even in the presence of nanometer-scale surface roughness, which outperform the corresponding non-robust designs by an order of magnitude. We discover a posteriori that the robust designs have smooth profiles that can be parameterized by a few-term (intrinsically smooth) sine series which helps the optimization to further boost the performance slightly. We ground these numerical results in an analytical foundation by deriving the scaling relationships between taper length, taper smoothness, and group velocity with the help of an exact equivalence with Fourier analysis.}
}

@article{KaufmanTa12,
author = { Joshua J. Kaufman and Guangming Tao and Soroush Shabahang and Esmaeil-Hooman Banaei and Daosheng S. Deng and Xiangdong Liang and Steven G. Johnson and Yoel Fink and Ayman F. Abouraddy},
title = {Structured spheres generated by an in-fibre fluid instability},
journal = {Nature},
year = 2012,
volume = 487,
pages = {463--467},
month = {July},
doi = {10.1038/nature11215},
pdf = {http://www.rle.mit.edu/pbg/Documents/Structured_spheres_generated_by_an_in-fibre_fluid_instability.pdf},
abstract = {From drug delivery to chemical and biological catalysis and cosmetics, the need for efficient fabrication pathways for particles over a wide range of sizes, from a variety of materials, and in many different structures has been well established. Here we harness the inherent scalability of fibre production and an in-fibre Plateau--Rayleigh capillary instability for the fabrication of uniformly sized, structured spherical particles spanning an exceptionally wide range of sizes: from 2~mm down to 20~nm. Thermal processing of a multimaterial fibre controllably induces the instability, resulting in a well-ordered, oriented emulsion in three dimensions. The fibre core and cladding correspond to the dispersed and continuous phases, respectively, and are both frozen in situ on cooling, after which the particles are released when needed. By arranging a variety of structures and materials in a macroscopic scaled-up model of the fibre, we produce composite, structured, spherical particles, such as core–shell particles, two-compartment Janus' particles, and multi-sectioned beach ball' particles. Moreover, producing fibres with a high density of cores allows for an unprecedented level of parallelization. In principle, $10^8$ 50-nm cores may be embedded in metres-long, 1-mm-diameter fibre, which can be induced to break up simultaneously throughout its length, into uniformly sized, structured spheres.}
}

@article{HashemiQi12,
pdf = {HashemiQi12.pdf},
author = {Hila Hashemi and Cheng Wei Qiu and Alexander P. McCauley and J. D. Joannopoulos and Steven G. Johnson},
title = {Diameter--bandwidth product limitation of isolated-object cloaking},
journal = {Physical Review~A},
year = 2012,
volume = 86,
pages = 013804,
doi = {10.1103/PhysRevA.86.013804},
eprint = {arXiv:1203.2190},
month = {July},
abstract = {We show that cloaking of isolated objects using transformation-based cloaks is subject to a diameter--bandwidth product limitation: as the size of the object increases, the bandwidth of good (small cross-section) cloaking decreases inversely with the diameter, as a consequence of causality constraints even for perfect fabrication and materials with negligible absorption. This generalizes a previous result that \emph{perfect} cloaking of isolated objects over a nonzero bandwidth violates causality. Furthermore, we demonstrate broader causality-based scaling limitations on any bandwidth-averaged cloaking cross-section, using complex analysis and the optical theorem to transform the frequency-averaged problem into a single scattering problem with transformed materials.}
}

@article{LuCh12,
pdf = {LuCh12.pdf},
author = {Ling Lu and Lin Lee Cheong and Henry I. Smith and Steven G. Johnson and John D. Joannopoulos and Marin Solja{\v{c}}i{\'{c}}},
title = {Three-dimensional photonic crystals by large-area membrane stacking},
journal = {Optics Letters},
year = 2012,
volume = 37,
pages = {4726--4728},
month = {November},
url = {http://www.opticsinfobase.org/ol/abstract.cfm?URI=ol-37-22-4726},
doi = {10.1364/OL.37.004726},
abstract = {We designed and analyzed a “mesh-stack” three-dimensional photonic crystal of a 12.4\% bandgap with a dielectric constant ratio of $12∶1$. The mesh-stack consists of four offset identical square-lattice air-hole patterned membranes in each vertical period that is equal to the in-plane period of the square lattice. This design is fully compatible with the membrane-stacking fabrication method, which is based on alignment and stacking of large-area single-crystal membranes containing engineered defects. A bandgap greater than 10\% is preserved as long as the membranes are subjected to in-plane misalignment less than 3\% of the square period. By introducing a linear defect with a nonsymmorphic symmetry into the mesh-stack, we achieved a single-mode waveguide over a wide bandwidth.}
}

@article{GabrielliLi12,
author = {Lucas H. Gabrielli and David Liu and Steven G. Johnson and Michal Lipson},
title = {On-chip transformation optics for multimode waveguide bends},
journal = {Nature Communications},
year = 2012,
volume = 3,
pages = 1217,
month = {November},
doi = {10.1038/ncomms2232},
abstract = {Current optical communication systems rely almost exclusively on multimode fibres for short- and medium-haul transmissions, and are now expanding into the long-haul arena. Ultra-high bandwidth applications are the main drive for this expansion, based on the ability to spatially multiplex data channels in multimode systems. Integrated photonics, on the other hand, although largely responsible for today’s telecommunications, continues to operate almost strictly in the single-mode regime. This is because multimode waveguides cannot be compactly routed on-chip without significant inter-mode coupling, which impairs their data rate and prevents the use of modal multiplexing. Here we propose a platform for on-chip multimode devices with minimal inter-mode coupling, opening up the possibilities for integrated multimode optics. Our work combines a novel theoretical approach---large-scale inverse design of transformation optics to maximize performance within fabrication constraints---with unique grayscale-lithography fabrication of an exemplary device: a low-crosstalk multimode waveguide bend.}
}

@article{RodriguezRe13-nonmonotonic,
pdf = {RodriguezRe13-nonmonotonic.pdf},
author = {Alejandro W. Rodriguez and M. T. Homer Reid and Jaime Varela and John D. Joannopoulos and Federico Capasso and Steven G. Johnson},
title = {Anomalous near-field heat transfer between a cylinder and a perforated surface},
journal = {Physical Review Letters},
year = 2013,
volume = 110,
pages = 014301,
eprint = {arXiv:1207.3784},
doi = {10.1103/PhysRevLett.110.014301},
month = {January},
abstract = {We predict that the radiative heat-transfer rate between a cylinder and a perforated surface depends non-monotonically on their separation. This anomalous behavior, which arises due to evanescent-wave effects, is explained using a heuristic model based on the interaction of a dipole with a plate. We show that nonmonotonicity depends not only on geometry and temperature but also on material dispersion---for micron and submicron objects, nonmonotonicity is present in polar dielectrics but absent in metals with small skin depths.}
}

@article{RodriguezRe12-FSC,
pdf = {RodriguezRe12-FSC.pdf},
author = {Alejandro W. Rodriguez and M. T. Homer Reid and Steven G. Johnson},
title = {Fluctuating surface-current formulation of radiative heat transfer for arbitrary geometries},
journal = {Physical Review~B},
year = 2012,
volume = 86,
pages = {220302(R)},
eprint = {arXiv:1206.1772},
month = {December},
doi = {10.1103/PhysRevB.86.220302},
abstract = {We describe a fluctuating surface-current formulation of radiative heat transfer, applicable to arbitrary geometries in both the near and far field, that directly exploits efficient and sophisticated techniques from the boundary-element method. We validate as well as extend previous results for spheres and cylinders, and also compute the heat transfer in a more complicated geometry consisting of two interlocked rings. Finally, we demonstrate how this method can be adapted to compute the spatial distribution of heat flux on the surfaces of the bodies. }
}

@article{ShemulyRu13,
author = {Dana Shemuly and Zachary M. Ruff and Alexander M. Stolyarov and Grisha Spektor and Steven G. Johnson and Yoel Fink and Ofer Shapira},
title = {Asymmetric wave propagation in planar chiral fibers},
journal = {Optics Express},
year = 2013,
volume = 21,
pages = {1465--1472},
month = {January},
url = {http://www.opticsinfobase.org/oe/abstract.cfm?URI=oe-21-2-1465},
doi = {10.1364/OE.21.001465},
abstract = {We demonstrate the realization of a two-dimensional chiral optical waveguide with an infinite translational symmetry that exhibits asymmetric wave propagation. The low-symmetry geometry of the cross-section that lacks any rotational and mirror symmetries shows emph{in-principal} directional asymmetric polarization rotation. We use general symmetry arguments to provide qualitative analysis of the waveguide's eigenstates and numerically corroborate this using finite element simulation. We show that despite the only perturbative break of time-reversal symmetry via small modal losses, the structure supports a non-degenerate pair of co-rotating elliptical modes. We fabricated meters long fiber with a spiral structure and studied its optical properties.}
}

@incollection{OskooiJo13-sources,
author = {Ardavan Oskooi and Steven G. Johnson},
title = {Electromagnetic wave source conditions},
booktitle = {Advances in {FDTD} Computational Electrodynamics: Photonics and Nanotechnology},
pages = {65--100},
publisher = {Artech},
year = 2013,
editor = {Allen Taflove and Ardavan Oskooi and Steven G. Johnson},
chapter = 4,
month = {January},
eprint = {arXiv:1301.5366},
isbn = {9781608071708},
abstract = {This chapter discusses the relationships between current sources and the resulting electromagnetic waves in FDTD simulations. First, the total-field/scattered-field'' approach to creating incident plane waves is reviewed and seen to be a special case of the well-known principle of equivalence in electromagnetism: this can be used to construct "equivalent" current sources for any desired incident field, including waveguide modes. The effects of dispersion and discretization are discussed, and a simple technique to separate incident and scattered fields is described in order to compensate for imperfect equivalent currents. The important concept of the local density of states (LDOS) is reviewed, which elucidates the relationship between current sources and the resulting fields, including enhancement of the LDOS via mode cutoffs (Van Hove singularities) and resonant cavities (Purcell enhancement). We also address various other source techniques such as covering a wide range of frequencies and incident angles in a small number of simulations for waves incident on a periodic surface, sources to excite eigenmodes in rectangular supercells of periodic systems, moving sources, and thermal sources via a Monte Carlo/Langevin approach. }
}

@book{TafloveOs13,
editor = {Allen Taflove and Ardavan Oskooi and Steven G. Johnson},
title = {Advances in {FDTD} Computational Electrodynamics: Photonics and Nanotechnology},
publisher = {Artech},
year = 2013,
month = {January},
isbn = {9781608071708},
abstract = {Advances in photonics and nanotechnology have the potential to revolutionize humanity’s ability to communicate and compute. To pursue these advances, it is mandatory to understand and properly model interactions of light with materials such as silicon and gold at the nanoscale, i.e., the span of a few tens of atoms laid side by side. These interactions are governed by the fundamental Maxwell’s equations of classical electrodynamics, supplemented by quantum electrodynamics.

This book presents the current state-of-the-art in formulating and implementing computational models of these interactions. Maxwell’s equations are solved using the finite-difference time-domain (FDTD) technique, pioneered by the senior editor, whose prior Artech House books in this area are among the top ten most-cited in the history of engineering. You discover the most important advances in all areas of FDTD and PSTD computational modeling of electromagnetic wave interactions.

This cutting-edge resource helps you understand the latest developments in computational modeling of nanoscale optical microscopy and microchip lithography. You also explore cutting-edge details in modeling nanoscale plasmonics, including nonlocal dielectric functions, molecular interactions, and multi-level semiconductor gain. Other critical topics include nanoscale biophotonics, especially for detecting early-stage cancers, and quantum vacuum, including the Casimir effect and blackbody radiation.}
}

@article{ZouMa13,
author = {J. Zou and Z. Marcet and A. W. Rodriguez and M. T. H. Reid and A. P. McCauley and I. I. Kravchenko and T. Lu and Y. Bao and S. G. Johnson and H. B. Chan},
title = {{Casimir} forces on a silicon micromechanical chip},
journal = {Nature Communications},
year = 2013,
volume = 4,
pages = {1845},
doi = {10.1038/ncomms2842},
eprint = {arXiv:1207.6163},
month = {May},
abstract = {Quantum fluctuations give rise to van der Waals and Casimir forces that dominate the interaction between electrically neutral objects at sub-micron separations. Under the trend of miniaturization, such quantum electrodynamical effects are expected to play an important role in micro- and nano-mechanical devices. Nevertheless, utilization of Casimir forces on the chip level remains a major challenge because all experiments so far require an external object to be manually positioned close to the mechanical element. Here by integrating a force-sensing micromechanical beam and an electrostatic actuator on a single chip, we demonstrate the Casimir effect between two micromachined silicon components on the same substrate. A high degree of parallelism between the two near-planar interacting surfaces can be achieved because they are defined in a single lithographic step. Apart from providing a compact platform for Casimir force measurements, this scheme also opens the possibility of tailoring the Casimir force using lithographically defined components of non-conventional shapes.}
}

@article{LiuGa13,
author = {David Liu and Lucas H. Gabrielli and Michal Lipson and Steven G. Johnson},
title = {Transformation inverse design},
journal = {Optics Express},
year = 2013,
volume = 21,
pages = {14223--14243},
month = {June},
url = {http://www.opticsinfobase.org/oe/abstract.cfm?URI=oe-21-12-14223},
doi = {10.1364/OE.21.014223},
abstract = {We present a new technique for the design of transformation-optics devices based on large-scale optimization to achieve the optimal effective isotropic dielectric materials within prescribed index bounds, which is computationally cheap because transformation optics circumvents the need to solve Maxwell’s equations at each step. We apply this technique to the design of multimode waveguide bends (realized experimentally in a previous paper) and mode squeezers, in which all modes are transported equally without scattering. In addition to the optimization, a key point is the identification of the correct boundary conditions to ensure reflectionless coupling to untransformed regions while allowing maximum flexibility in the optimization. Many previous authors in transformation optics used a certain kind of quasiconformal map which overconstrained the problem by requiring that the entire boundary shape be specified a priori while at the same time underconstraining the problem by employing “slipping” boundary conditions that permit unwanted interface reflections.}
}

@article{HsuZh13,
author = { Chia Wei Hsu and Bo Zhen and Jeongwon Lee and Song-Liang Chua and Steven G. Johnson and John D. Joannopoulos and Marin Solja{\v{c}}i{\'{c}}},
title = {Observation of trapped light within the radiation continuum},
journal = {Nature},
year = 2013,
volume = 499,
pages = {188--191},
month = {July},
doi = {10.1038/nature12289},
abstract = {The ability to confine light is important both scientifically and technologically. Many light confinement methods exist, but they all achieve confinement with materials or systems that forbid outgoing waves. These systems can be implemented by metallic mirrors, by photonic band-gap materials, by highly disordered media (Anderson localization) and, for a subset of outgoing waves, by translational symmetry (total internal reflection1) or by rotational or reflection symmetry. Exceptions to these examples exist only in theoretical proposals. Here we predict and show experimentally that light can be perfectly confined in a patterned dielectric slab, even though outgoing waves are allowed in the surrounding medium. Technically, this is an observation of an ‘embedded eigenvalue---namely, a bound state in a continuum of radiation modes---that is not due to symmetry incompatibility. Such a bound state can exist stably in a general class of geometries in which all of its radiation amplitudes vanish simultaneously as a result of destructive interference. This method to trap electromagnetic waves is also applicable to electronic and mechanical waves.}
}

@article{DeLacyQiu13,
author = {Brendan G. DeLacy and Wenjun Qiu and Marin Solja{\v{c}}i{\'{c}} and Chia Wei Hsu and Owen D. Miller and Steven G. Johnson and John D. Joannopoulos},
title = {Layer-by-layer self-assembly of plexcitonic nanoparticles},
journal = {Optics Express},
year = 2013,
volume = 21,
pages = {19103--19112},
month = {August},
doi = {10.1364/OE.21.019103},
url = {http://www.opticsinfobase.org/oe/abstract.cfm?URI=oe-21-16-19103},
abstract = {Colloidal suspensions of multilayer nanoparticles composed of a silver core, a polyelectrolyte spacer layer (inner shell), and a J-aggregate cyanine dye outer shell have been prepared for the first time. Absorption properties of the colloid were measured in the visible region. This multilayer architecture served as a framework for examining the coupling of the localized surface plasmon resonance exhibited by the silver core with the molecular exciton exhibited by the J-aggregate outer shell. The polyelectrolyte spacer layer promotes the formation of an excitonic J-aggregate while serving as a means of controlling the plasmon-exciton (i.e. plexciton) coupling strength through changing the distance between the core and the shell. An analytical expression based on Mie Theory and the Transfer Matrix Method was obtained for describing the optical response of these multilayered nanostructures. Computational and experimental results indicate that the absorption wavelength of the J-aggregate form of the dye is dependent on both the distance of the dye layer from the silver core and the degree of dye aggregation.}
}

@article{MovassaghJo13,
author = {Ramis Movassagh and Steven G. Johnson},
title = {Optical {Bernoulli} forces},
journal = {Physical Review~A},
year = 2013,
volume = 88,
pages = 023829,
month = {August},
eprint = {arXiv:1305.0317},
doi = {10.1103/PhysRevA.88.023829},
abstract = {By Bernoulli's law, an increase in the relative speed of a fluid around a body is accompanied by a decrease in the pressure. Therefore, a rotating body in a fluid stream experiences a force perpendicular to the motion of the fluid because of the unequal relative speed of the fluid across its surface. It is well known that light has a constant speed irrespective of the relative motion. Does a rotating body immersed in a stream of photons experience a Bernoulli-like force? We show that, indeed, a rotating dielectric cylinder experiences such a lateral force from an electromagnetic wave. In fact, the sign of the lateral force is the same as that of the fluid-mechanical analog as long as the electric susceptibility is positive ($\varepsilon > \varepsilon_0$), but for negative-susceptibility materials (e.g., metals) we show that the lateral force is in the opposite direction. Because these results are derived from a classical electromagnetic scattering problem, Mie-resonance enhancements that occur in other scattering phenomena also enhance the lateral force.}
}

@article{ZhenCh13,
pdf = {ZhenCh13.pdf},
author = {Bo Zhen and Song-Liang Chua and Jeongwon Lee and Alejandro W. Rodriguez and Xiangdong Liang and Steven G. Johnson and John D. Joannopoulos and Marin Solja{\v{c}}i{\'{c}} and Ofer Shapira},
title = {Enabling enhanced emission and low-threshold lasing of organic molecules using special {Fano} resonances of macroscopic photonic crystals},
journal = {Proceedings of the National Academy of Sciences},
year = 2013,
volume = 110,
number = 34,
pages = {13711--13716},
month = {August},
doi = {10.1073/pnas.1311866110},
abstract = {The nature of light interaction with matter can be dramatically altered in optical cavities, often inducing nonclassical behavior. In solid-state systems, excitons need to be spatially incorporated within nanostructured cavities to achieve such behavior. Although fascinating phenomena have been observed with inorganic nanostructures, the incorporation of organic molecules into the typically inorganic cavity is more challenging. Here, we present a unique optofluidic platform comprising organic molecules in solution suspended on a photonic crystal surface, which supports macroscopic Fano resonances and allows strong and tunable interactions with the molecules anywhere along the surface. We develop a theoretical framework of this system and present a rigorous comparison with experimental measurements, showing dramatic spectral and angular enhancement of emission. We then demonstrate that these enhancement mechanisms enable lasing of only a 100-nm thin layer of diluted solution of organic molecules with substantially reduced threshold intensity, which has important implications for organic light-emitting devices and molecular sensing.}
}

@article{ReidWh13,
author = {M. T. Homer Reid and Jacob White and Steven G. Johnson},
title = {Fluctuating surface currents: An algorithm for efficient prediction of {Casimir} interactions among arbitrary materials in arbitrary geometries.},
journal = {Physical Review~A},
year = 2013,
volume = 88,
pages = 022514,
doi = {10.1103/PhysRevA.88.022514},
eprint = {arXiv:1203.0075},
month = {August},
abstract = {This paper presents a method for the efficient numerical computation of Casimir interactions between objects of arbitrary geometries, composed of materials with arbitrary frequency-dependent electrical properties. Our method formulates the Casimir effect as an interaction between effective electric and magnetic current distributions on the surfaces of material bodies and obtains Casimir energies, forces, and torques from the spectral properties of a matrix that quantifies the interactions of these surface currents. The method can be formulated and understood in two distinct ways: (1) as a consequence of the familiar stress-tensor approach to Casimir physics, or, alternatively, (2) as a particular case of the path-integral approach to Casimir physics, and we present both formulations in full detail. In addition to providing an algorithm for computing Casimir interactions in geometries that could not be efficiently handled by any other method, the framework proposed here thus achieves an explicit unification of two seemingly disparate approaches to computational Casimir physics.}
}

@article{KaufmanOt13,
author = {Joshua J. Kaufman and Richard Ottman and Guangming Tao and Soroush Shabahang and Esmaeil-Hooman Banaei and Xiangdong Liang and Steven G. Johnson and Yoel Fink and Ratna Chakrabarti and Ayman F. Abouraddy},
title = {In-fiber production of polymeric particles for biosensing and encapsulation},
journal = {Proceedings of the National Academy of Sciences},
year = 2013,
volume = 110,
pages = {15549--15554},
month = {September},
doi = {10.1073/pnas.1310214110},
abstract = {A scalable, chemistry-independent, fluid-instability--mediated in-fiber route for fabricating uniformly sized spherical polymeric particles over a wide span of diameters is developed targeting biomedical applications. Both surface functionalization of solid biocompatible polymer particles for protein--protein interactions and volume encapsulation of a biological material in spherical hollow polymer shells are confirmed, in addition to combining both surface and volumetric functionalities in the same polymeric particle.}
}

@article{WoolfHu13,
author = {David Woolf and Pui-Chuen Hui and Eiji Iwase and Mughees Khan and Alejandro W. Rodriguez and Parag Deotare and Irfan Bulu and Steven G. Johnson and Federico Capasso and Marko Lon{\v{c}}ar},
title = {Optomechanical and photothermal interactions in suspended photonic crystal membranes},
journal = {Optics Express},
year = 2013,
volume = 21,
pages = {7258--7275},
month = {March},
doi = {10.1364/OE.21.007258},
abstract = {We present here an optomechanical system fabricated with novel stress management techniques that allow us to suspend an ultrathin defect-free silicon photonic-crystal membrane above a Silicon-on-Insulator (SOI) substrate with a gap that is tunable to below 200~nm. Our devices are able to generate strong attractive and repulsive optical forces over a large surface area with simple in- and out- coupling and feature the strongest repulsive optomechanical coupling in any geometry to date ($g_{OM}/2\pi \approx −65$~GHz/nm). The interplay between the optomechanical and photo-thermal-mechanical dynamics is explored, and the latter is used to achieve cooling and amplification of the mechanical mode, demonstrating that our platform is well-suited for potential applications in low-power mass, force, and refractive-index sensing as well as optomechanical accelerometry.}
}

@article{HuiWo13,
author = {Pui-Chuen Hui and David Woolf and Eiji Iwase and Young-Ik Sohn and Daniel Ramos and Mughees Khan and Alejandro W. Rodriguez and Steven G. Johnson and Federico Capasso and Marko Lon{\v{c}}ar},
title = {Optical bistability with a repulsive optical force in coupled silicon photonic crystal membranes},
journal = {Applied Physics Letters},
year = 2013,
volume = 103,
pages = 021102,
month = {July},
doi = {10.1063/1.4813121},
abstract = {We demonstrate actuation of a silicon photonic crystal membrane with a repulsive optical gradient force. The extent of the static actuation is extracted by examining the optical bistability as a combination of the optomechanical, thermo-optic, and photo-thermo-mechanical effects using coupled-mode theory. Device behavior is dominated by a repulsive optical force which results in displacements of $\approx 1$~nm/mW. By employing an extended guided resonance which effectively eliminates multi-photon thermal and electronic nonlinearities, our silicon-based device provides a simple, non-intrusive solution to extending the actuation range of micro-electromechanical devices.}
}

@article{GumennikWe13,
author = {Alexander Gumennik and Lei Wei and Guillaume Lestoquoy and Alexander M. Stolyarov and Xiaoting Jia and Paul H. Rekemeyer and Matthew J. Smith and Xiangdong Liang and Benjamin J.-B. Grena and Steven G. Johnson and Silvija Grade{\v{c}}ak and Ayman F. Abouraddy and John D. Joannopoulos and Yoel Fink},
title = {Silicon-in-silica spheres via axial thermal gradient in-fibre capillary instabilities},
journal = {Nature Communications},
year = 2013,
volume = 4,
pages = 2216,
month = {July},
doi = {10.1038/ncomms3216},
abstract = {The ability to produce small scale, crystalline silicon spheres is of significant technological and scientific importance, yet scalable methods for doing so have remained elusive. Here we demonstrate a silicon nanosphere fabrication process based on an optical fibre drawing technique. A silica-cladded silicon-core fibre with diameters down to 340~nm is continuously fed into a flame defining an axial thermal gradient and the continuous formation of spheres whose size is controlled by the feed speed is demonstrated. In particular, spheres of diameter $<500$~nm smaller than those produced under isothermal heating conditions are shown and analysed. A fibre with dual cores, p-type and n-type silicon, is drawn and processed into spheres. Spatially coherent break-up leads to the joining of the spheres into a bispherical silicon p--n molecule'. The resulting device is measured to reveal a rectifying I--V curve consistent with the formation of a p--n junction.}
}

@article{RodriguezReIn13,
pdf = {RodriguezReIn13.pdf},
author = {Alejandro W. Rodriguez and M. T. Homer Reid and Francesco Intravaia and Alexander Woolf and Diego A. R. Dalvit and Federico Capasso and Steven G. Johnson},
title = {Geometry-Induced {Casimir} Suspension of Oblate Bodies in Fluids},
journal = {Physical Review Letters},
year = 2013,
volume = 111,
pages = 180402,
month = {November},
doi = {10.1103/PhysRevLett.111.180402},
eprint = {arXiv:1310.4396},
abstract = {We predict that a low-permittivity oblate body (disk-shaped object) above a thin metal substrate (plate with a hole) immersed in a fluid of intermediate permittivity will experience a metastable equilibrium (restoring force) near the center of the hole. Stability is the result of a geometry-induced transition in the sign of the force, from repulsive to attractive, that occurs as the disk approaches the hole—in planar or nearly planar geometries, the same material combination yields a repulsive force at all separations, in accordance with the Dzyaloshinski{\u{i}}-Lifshitz-Pitaevski{\u{i}} condition of fluid-induced repulsion between planar bodies. We explore the stability of the system with respect to rotations and lateral translations of the disks and demonstrate interesting transitions (bifurcations) in the rotational stability of the disks as a function of their size. Finally, we consider the reciprocal situation in which the disk-plate materials are interchanged and find that in this case the system also exhibits metastability. The forces in the system are sufficiently large to be observed in experiments and should enable measurements based on the diffusion dynamics of the suspended bodies.}
}

@article{LiangJo13,
author = {Xiangdong Liang and Steven G. Johnson},
title = {Formulation for scalable optimization of microcavities via the frequency-averaged local density of states},
journal = {Optics Express},
year = 2013,
volume = 21,
pages = {30812--30841},
month = {December},
doi = {10.1364/OE.21.030812},
abstract = {We present a technique for large-scale optimization of optical microcavities based on the frequency-averaged local density of states (LDOS), which circumvents computational difficulties posed by previous eigenproblem-based formulations and allows us to perform full topology optimization of three-dimensional (3d) leaky cavity modes. We present theoretical results for both 2d and fully 3d computations in which every pixel of the design pattern is a degree of freedom (topology optimization''), e.g. for lithographic patterning of dielectric slabs in 3d. More importantly, we argue that such optimization techniques can be applied to design cavities for which (unlike silicon-slab single-mode cavities) hand designs are difficult or unavailable, and in particular we design minimal-volume multi-mode cavities (e.g. for nonlinear frequency-conversion applications).}
}

@article{RodriguezRe13-heat,
pdf = {RodriguezRe13-heat.pdf},
author = {Alejandro W. Rodriguez and M. T. Homer Reid and Steven G. Johnson},
title = {Fluctuating surface-current formulation of radiative heat transfer: Theory and applications},
journal = {Physical Review~B},
year = 2013,
volume = 88,
pages = 054305,
eprint = {arXiv:1304.1215},
month = {August},
doi = {10.1103/PhysRevB.88.054305 },
abstract = {We describe a novel fluctuating-surface current formulation of radiative heat transfer between bodies of arbitrary shape that exploits efficient and sophisticated techniques from the surface-integral-equation formulation of classical electromagnetic scattering. Unlike previous approaches to non-equilibrium fluctuations that involve scattering matrices---relating incoming'' and outgoing'' waves from each body---our approach is formulated in terms of unknown'' surface currents, laying at the surfaces of the bodies, that need not satisfy any wave equation. We show that our formulation can be applied as a spectral method to obtain fast-converging semi-analytical formulas in high-symmetry geometries using specialized spectral bases that conform to the surfaces of the bodies (e.g. Fourier series for planar bodies or spherical harmonics for spherical bodies), and can also be employed as a numerical method by exploiting the generality of surface meshes/grids to obtain results in more complicated geometries (e.g. interleaved bodies as well as bodies with sharp corners). In particular, our formalism allows direct application of the boundary-element method, a robust and powerful numerical implementation of the surface-integral formulation of classical electromagnetism, which we use to obtain results in new geometries, including the heat transfer between finite slabs, cylinders, and cones.}
}

@incollection{JohnsonMc14,
pdf = {JohnsonMc14.pdf},
author = {Steven G. Johnson and Alexander P. McCauley and Alejandro Rodriguez-Wong},
title = {Computation and visualization of photonic quasicrystal spectra},
booktitle = {Optics of Aperiodic Structures: Fundamentals and Device Applications},
pages = {451--489},
publisher = {Pan Stanford Publishing},
year = 2014,
editor = {Luca Dal Negro},
chapter = 11,
month = {January},
url = {http://www.panstanford.com/books/9789814463089.html},
doi = {10.4032/9789814463096},
abstract = {In this chapter, we describe various approaches to computing the spectra of photonic quasicrystals (PQCs).  We focus on a recently developed \emph{super-space method} for computing the spectra and eigenstates of PQCs defined by the standard cut-and-project construction, that involves directly solving Maxwell's equations in higher dimensions, where a generalization of Bloch's theorem applies.  We emphasize the conceptual and practical differences between super-space and \emph{supercell methods}, which involve computing the eigenfrequencies and/or local density of states to an approximation of the true aperiodic structure.}
}

@article{HsuZh13-Bloch,
author = {Chia Wei Hsu and Bo Zhen and Song-Liang Chua and Steven G. Johnson and John D. Joannopoulos and Marin Solja{\v{c}}i{\'{c}}},
title = {Bloch surface eigenstates within the radiation continuum},
journal = {Light: Science & Applications},
year = 2013,
volume = 2,
pages = {e84},
month = {July},
doi = {10.1038/lsa.2013.40},
pdf = {http://www.mit.edu/~soljacic/BIC_nature_lsa.pdf},
note = {Invited paper.},
abstract = {From detailed numerical calculations, we demonstrate that in simple photonic crystal structures, a discrete number of Bloch surface-localized eigenstates can exist inside the continuum of free-space modes. Coupling to the free space causes the surface modes to leak, but the forward and back-reflected leakage may interfere destructively to create a perfectly bound surface state with zero leakage. We perform analytical temporal coupled-mode theory analysis to show the generality of such phenomenon and its robustness from variations of system parameters. Periodicity, time-reversal invariance, two-fold rotational symmetry and a perfectly reflecting boundary are necessary for these unique states.}
}

@article{WongKa14,
pdf = {WongKa14.pdf},
author = {Liang Jie Wong and Franz. X. K{\"{a}}rtner and Steven G. Johnson},
title = {Improved beam waist formula for ultrashort, tightly focused linearly, radially, and azimuthally polarized laser pulses in free space},
journal = {Optics Letters},
year = 2014,
volume = 39,
pages = {1258--1261},
month = {February},
eprint = {arXiv:1311.5788},
doi = {10.1364/OL.39.001258},
abstract = {We derive an asymptotically accurate formula for the beam waist of ultrashort, tightly focused fundamental linearly polarized, radially polarized, and azimuthally polarized modes in free space. We compute the exact beam waist via numerical cubature to ascertain the accuracy with which our formula approximates the exact beam waist over a broad range of parameters of practical interest. Based on this, we describe a method of choosing parameters in the model given the beam waist and pulse duration of a laser pulse.}
}

@article{MillerHs14,
pdf = {MillerHs14.pdf},
author = {Owen D. Miller and Chia W. Hsu and M. T. Homer Reid and Wenjun Qiu and Brendan G. DeLacy and John D. Joannopoulos and Marin Solja{\v{c}}i{\'{c}} and Steven G. Johnson},
title = {Fundamental limits to extinction by metallic nanoparticles},
journal = {Physical Review Letters},
year = 2014,
volume = 112,
pages = 123903,
eprint = {arXiv:1311.1445},
doi = {10.1103/PhysRevLett.112.123903},
month = {March},
abstract = {We show that there are shape-independent upper bounds to the extinction cross section per unit volume of dilute, randomly arranged nanoparticles, given only material permittivity. Underlying the limits are restrictive sum rules that constrain the distribution of quasistatic eigenvalues. Surprisingly, optimally designed spheroids, with only a single quasistatic degree of freedom, reach the upper bounds for four permittivity values. Away from these permittivities, we demonstrate computationally optimized structures that surpass spheroids and approach the fundamental limits.}
}

@article{ShenYe14,
author = {Yichen Shen and Dexin Ye and Ivan Celanovic and Steven G. Johnson and John D. Joannopoulos and and Marin Solja{\v{c}}i{\'{c}}},
title = {Optical broadband angular selectivity},
journal = {Science},
year = 2014,
volume = 343,
pages = {1499--1501},
month = {March},
doi = {10.1126/science.1249799},
pdf = {http://www.mit.edu/~soljacic/angular-selectivity_Science.pdf},
abstract = {Light selection based purely on the angle of propagation is a long-standing scientific challenge. In angularly selective systems, however, the transmission of light usually also depends on the light frequency. We tailored the overlap of the band gaps of multiple one-dimensional photonic crystals, each with a different periodicity, in such a way as to preserve the characteristic Brewster modes across a broadband spectrum. We provide theory as well as an experimental realization with an all–visible spectrum, p-polarized angularly selective material system. Our method enables transparency throughout the visible spectrum at one angle—the generalized Brewster angle—and reflection at every other viewing angle.}
}

@article{MillerJo14,
pdf = {MillerJo14.pdf},
author = {Owen D. Miller and Steven G. Johnson and Alejandro W. Rodriguez},
title = {The effectiveness of thin films in lieu of hyperbolic metamaterials in the near field},
journal = {Physical Review Letters},
year = 2014,
volume = 112,
pages = 157402,
eprint = {arXiv:1311.5812},
month = {April},
doi = {10.1103/PhysRevLett.112.157402},
abstract = {We show that the near-field functionality of hyperbolic metamaterials (HMM), typically proposed for increasing the photonic local density of states (LDOS), can be achieved with thin metal films. Although HMMs have an infinite density of internally propagating plane-wave states, the external coupling to nearby emitters is severely restricted. We show analytically that properly designed thin films, of thicknesses comparable to the metal size of a hyperbolic metamaterial, yield an LDOS as high as (if not higher than) that of HMMs. We illustrate these ideas by performing exact numerical computations of the LDOS of multilayer HMMs, along with their application to the problem of maximizing near-field heat transfer, to show that single-layer thin films are suitable replacements in both cases.}
}

@article{HsuDe14,
author = {Chia Wei Hsu and Brendan G DeLacy and Steven G. Johnson and John D. Joannopoulos and Marin Solja{\v{c}}i{\'{c}}},
title = {Theoretical criteria for scattering dark states in nanostructured particles},
journal = {Nano Letters},
year = 2014,
volume = 14,
pages = {2783--2788},
month = {May},
doi = {10.1021/nl500340n},
pdf = {http://www.mit.edu/~soljacic/scattering_dark_state-NanoLett.pdf},
abstract = {Nanostructures with multiple resonances can exhibit a suppressed or even completely eliminated scattering of light, called a scattering dark state. We describe this phenomenon with a general treatment of light scattering from a multi-resonant nanostructure that is spherical or non-spherical but subwavelength in size. With multiple resonances in the same channel (i.e. same angular momentum and polarization), coherent interference always leads to scattering dark states in the low-absorption limit, regardless of the system details. The coupling between resonances is inevitable and can be interpreted as arising from far-field or near-field. This is a realization of coupled-resonator-induced transparency in the context of light scattering, which is related to but different from Fano resonances. Explicit examples are given to illustrate these concepts.}
}

@article{LinAl14,
pdf = {LinAl14.pdf},
author = {Zin Lin and Thomas Alcorn and Marko Lon{\v{c}}ar and Steven G. Johnson and Alejandro W. Rodriguez},
title = {High-efficiency degenerate four-wave mixing in triply resonant nanobeam cavities},
journal = {Physical Review~A},
year = 2014,
volume = 89,
pages = 053839,
month = {May},
doi = {10.1103/PhysRevA.89.053839},
abstract = {Using a combination of temporal coupled-mode theory and nonlinear finite-difference time-domain (FDTD) simulations, we study the nonlinear dynamics of all-resonant four-wave mixing processes and demonstrate the possibility of achieving high-efficiency limit cycles and steady states that lead to ≈100\% depletion of the incident light at low input (critical) powers. Our analysis extends previous predictions to capture important effects associated with losses, self- and cross-phase modulation, and imperfect frequency matching (detuning) of the cavity frequencies. We find that maximum steady-state conversion is hypersensitive to frequency mismatch, resulting in high-efficiency limit cycles that arise from the presence of a homoclinic bifurcation in the solution phase space, but that a judicious choice of incident frequencies and input powers, in conjuction with self-phase and cross-phase modulation, can restore high-efficiency steady-state conversion even for large frequency mismatch. Assuming operation in the telecom range, we predict close to perfect quantum efficiencies at reasonably low $\sim 50$mW input powers in silicon micrometer-scale PhC nanobeam cavities.}
}

@article{EsterhazyLiu14,
pdf = {EsterhazyLiu14.pdf},
author = {S. Esterhazy and D. Liu and M. Liertzer and A. Cerjan and L. Ge and K. G. Makris and A. D. Stone and J. M. Melenk and S. G. Johnson and S. Rotter},
title = {Scalable numerical approach for the steady-state {\it ab-initio} laser theory},
journal = {Physical Review~A},
year = 2014,
volume = 90,
pages = 023816,
eprint = {arXiv:1312.2488},
doi = {10.1103/PhysRevA.90.023816},
month = {August},
abstract = {We present an efficient and flexible method for solving the non-linear lasing equations of the steady-state {\it ab initio} laser theory. Our strategy is to solve the underlying system of partial differential equations directly, without the need of setting up a parametrized basis of constant flux states. We validate this approach in one-dimensional as well as in cylindrical systems, and demonstrate its scalability to full-vector three-dimensional calculations in photonic-crystal slabs. Our method paves the way for efficient and accurate simulations of microlasers which were previously inaccessible.}
}

@article{MenLee14,
author = {Han Men and Karen Y. K. Lee and Robert M. Freund and Jaime Peraire and Steven G. Johnson},
title = {Robust topology optimization of three-dimensional photonic-crystal band-gap structures},
journal = {Optics Express},
year = 2014,
volume = 22,
pages = {22632--22648},
eprint = {arXiv:1405.4350},
month = {September},
doi = {10.1364/OE.22.022632},
abstract = {We perform full 3D topology optimization (in which every voxel'' of the unit cell is a degree of freedom) of photonic-crystal structures in order to find optimal omnidirectional band gaps for various symmetry groups, including fcc (including diamond), bcc, and simple-cubic lattices. Even without imposing the constraints of any fabrication process, the resulting optimal gaps are only slightly larger than previous hand designs, suggesting that current photonic crystals are nearly optimal in this respect. However, optimization can discover new structures, \textit{e.g.} a new fcc structure with the same symmetry but slightly larger gap than the well known inverse opal, which may offer new degrees of freedom to future fabrication technologies. Furthermore, our band-gap optimization is an illustration of a computational approach to 3D dispersion engineering which is applicable to many other problems in optics, based on a novel semidefinite-program formulation for nonconvex eigenvalue optimization combined with other techniques such as a simple approach to impose symmetry constraints. We also demonstrate a technique for \emph{robust} topology optimization, in which some uncertainty is included in each voxel and we optimize the worst-case gap, and we show that the resulting band gaps have increased robustness to systematic fabrication errors.}
}

@article{Welters14,
pdf = {Welters14.pdf},
author = {Aaron Welters and Yehuda Avniel and Steven G. Johnson},
title = {Speed-of-light limitations in passive linear media},
journal = {Physical Review~A},
volume = 90,
pages = 023847,
year = 2014,
eprint = {arXiv:1405.0238},
month = {August},
doi = {10.1103/PhysRevA.90.023847},
abstract = {We prove that well-known speed of light restrictions on electromagnetic energy velocity can be extended to a new level of generality, encompassing even nonlocal chiral media in periodic geometries, while at the same time weakening the underlying assumptions to only passivity and linearity of the medium (either with a transparency window or with dissipation). As was also shown by other authors under more limiting assumptions, passivity alone is sufficient to guarantee causality and positivity of the energy density (with no thermodynamic assumptions). Our proof is general enough to include a very broad range of material properties, including anisotropy, bianisotropy (chirality), nonlocality, dispersion, periodicity, and even delta functions or similar generalized functions. We also show that the "dynamical energy density" used by some previous authors in dissipative media reduces to the standard Brillouin formula for dispersive energy density in a transparency window. The results in this paper are proved by exploiting deep results from linear-response theory, harmonic analysis, and functional analysis that had previously not been brought together in the context of electrodynamics.}
}

@article{ReidWhJo14,
pdf = {ReidWhJo14.pdf},
author = {M. T. Homer Reid and Jacob K. White and Steven G. Johnson},
title = {Generalized {Taylor}--{Duffy} Method for Efficient Evaluation of {Galerkin} Integrals in Boundary-Element Method Computations},
journal = {IEEE Transactions on Antennas and Propagation},
year = 2014,
volume = {63},
pages = {195--209},
eprint = {arXiv:1312.1703},
month = {November},
doi = {10.1109/TAP.2014.2367492},
abstract = {We present a generic technique, automated by computer-algebra systems and available as open-source software, for efficient numerical evaluation of a large family of singular and nonsingular 4-dimensional integrals over triangleproduct domains, such as those arising in the boundary-element method (BEM) of computational electromagnetism. Previously, practical implementation of BEM solvers often required the aggregation of multiple disparate integral-evaluation schemes in order to treat all of the distinct types of integrals needed for a given BEM formulation; in contrast, our technique allows many different types of integrals to be handled by the same algorithm and the same code implementation. Our method is a significant generalization of the Taylor--Duffy approach, which was originally presented for just a single type of integrand; in addition to generalizing this technique to a broad class of integrands, we also achieve a significant improvement in its efficiency by showing how the dimension of the final numerical integral may often reduced by one. In particular, if n is the number of common vertices between the two triangles, in many cases we can reduce the dimension of the integral from $4−n$ to $3−n$, obtaining a closed-form analytical result for $n=3$ (the common-triangle case). }
}

@article{LiangFr15,
pdf = {LiangFr15.pdf},
author = {Liang Jie Wong and Byron Freelon and Timm Rohwer and Nuh Gedik and Steven G. Johnson},
title = {All-optical three-dimensional electron pulse compression},
journal = {New Journal of Physics},
year = 2015,
volume = 17,
pages = 013051,
eprint = {arXiv:1409.6400},
month = {January},
doi = {10.1088/1367-2630/17/1/013051},
abstract = {We propose an all-optical, three-dimensional electron pulse compression scheme in which Hermite--Gaussian optical modes are used to fashion a three-dimensional optical trap in the electron pulse's rest frame. We show that the correct choices of optical incidence angles are necessary for optimal compression. We obtain analytical expressions for the net impulse imparted by Hermite–Gaussian free-space modes of arbitrary order. Although we focus on electrons, our theory applies to any charged particle and any particle with non-zero polarizability in the Rayleigh regime. We verify our theory numerically using exact solutions to Maxwell's equations for first-order Hermite–Gaussian beams, demonstrating single-electron pulse compression factors of $> 10^2$ in both longitudinal and transverse dimensions with experimentally realizable optical pulses. The proposed scheme is useful in ultrafast electron imaging for both single- and multi-electron pulse compression, and as a means of circumventing temporal distortions in magnetic lenses when focusing ultrashort electron pulses. Other applications include the creation of flat electron beams and ultrashort electron bunches for coherent terahertz emission.}
}

@article{DeLacyMi15,
author = {Brendan G. DeLacy and Owen D. Miller and Chia Wei Hsu and Zachary Zander and Steven Lacey and Raymond Yagloski and Augustus W. Fountain and Erica Valdes and Emma Anquillare and Marin Solja{\v{c}}i{\'{c}} and Steven G. Johnson and John D. Joannopoulos},
title = {Coherent plasmon--exciton coupling in silver platelet-{J}-aggregate nanocomposites},
journal = {Nano Letters},
volume = 15,
pages = {2588--2593},
year = 2015,
month = {February},
doi = {10.1021/acs.nanolett.5b00157},
abstract = {Hybrid nanostructures that couple plasmon and exciton resonances generate hybridized energy states, called plexcitons, which may result in unusual light-matter interactions. We report the formation of a transparency dip in the visible spectra of colloidal suspensions containing silver nanoplatelets and a cyanine dye, 1,$1'$-diethyl-2,$2'$-cyanine iodide (PIC). PIC was electrostatically adsorbed onto the surface of silver nanoplatelet core particles, forming an outer J-aggregate shell. This core–shell architecture provided a framework for coupling the plasmon resonance of the silver nanoplatelet core with the exciton resonance of the J-aggregate shell. The sizes and aspect ratios of the silver nanoplatelets were controlled to ensure the overlap of the plasmon and exciton resonances. As a measure of the plasmon-exciton coupling strength in the system, the experimentally observed transparency dips correspond to a Rabi splitting energy of 207~meV, among the highest reported for colloidal nanoparticles. The optical properties of the silver platelet-J-aggregate nanocomposites were supported numerically and analytically by the boundary-element method and temporal coupled-mode theory, respectively. Our theoretical predictions and experimental results confirm the presence of a transparency dip for the silver nanoplatelet core J-aggregate shell structures. Additionally, the numerical and analytical calculations indicate that the observed transparencies are dominated by the coupling of absorptive resonances, as opposed to the coupling of scattering resonances. Hence, we describe the suppressed extinction in this study as an induced transparency rather than a Fano resonance.}
}

@article{HsuMi15,
author = {Chia Wei Hsu and Owen D. Miller and Steven G. Johnson and Marin Solja{\v{c}}i{\'{c}}},
title = {Optimization of sharp and viewing-angle-independent structural color},
journal = {Optics Express},
volume = 23,
pages = {9516--9526},
year = 2015,
doi = {10.1364/OE.23.009516},
eprint = {arXiv:1410.8605},
month = {April},
abstract = {Structural coloration produces some of the most brilliant colors in nature and has many applications. Motivated by the recently proposed transparent displays that are based on wavelength-selective scattering, here we consider the new problem of \emph{transparent} structural color, where objects are transparent under omnidirectional broad-band illumination but scatter strongly with a directional narrow-band light source. Transparent structural color requires two competing properties, narrow bandwidth and broad viewing angle, that have not been demonstrated simultaneously previously. Here, we use numerical optimization to discover geometries where a sharp 7\% bandwidth in scattering is achieved, yet the peak wavelength varies less than 1\%, and the peak height and peak width vary less than 6\% over broad viewing angles (0--$90^\circ$) under a directional illumination. Our model system consists of dipole scatterers arranged into several rings; interference among the scattered waves is optimized to yield the wavelength-selective and angle-insensitive response.}
}

@article{PolimeridisRe14,
author = {Athanasios G. Polimeridis and M. T. Homer Reid and Steven G. Johnson and Jacob K. White and Alejandro W. Rodriguez},
title = {On the computation of power in volume integral equation formulations},
journal = {IEEE Transactions on Antennas and Propagation},
year = 2014,
volume = 63,
pages = {611--620},
eprint = {arXiv:1406.7260},
month = {December},
doi = {10.1109/TAP.2014.2382636},
abstract = {We present simple and stable formulas for computing power (including absorbed/radiated, scattered and extinction power) in current-based volume integral equation formulations. The proposed formulas are given in terms of vector-matrix-vector products of quantities found solely in the associated linear system. In addition to their efficiency, the derived expressions can guarantee the positivity of the computed power. We also discuss the application of Poynting's theorem for the case of sources immersed in dissipative materials. The formulas are validated against results obtained both with analytical and numerical methods for scattering and radiation benchmark cases.}
}

@article{KhandekarPi14,
author = {Chinmay Khandekar and Adi Pick and Steven G. Johnson and Alejandro W. Rodriguez},
title = {Radiative heat transfer in nonlinear {Kerr} media},
journal = {Physical Review~B},
volume = 91,
pages = 115406,
year = 2015,
eprint = {arXiv:1406.4074},
doi = {10.1103/PhysRevB.91.115406},
month = {March},
abstract = {We obtain a fluctuation-dissipation theorem describing thermal electromagnetic fluctuation effects in nonlinear media that we exploit in conjunction with a stochastic Langevin framework to study thermal radiation from Kerr ($\chi^{(3)}$) photonic cavities coupled to external environments at and out of equilibrium. We show that, in addition to thermal broadening due to two-photon absorption, the emissivity of such cavities can exhibit asymmetric, non-Lorentzian line shapes due to self-phase modulation. When the local temperature of the cavity is larger than that of the external bath, we find that the heat transfer into the bath exceeds the radiation from a corresponding linear blackbody at the same local temperature. We predict that these temperature-tunable thermal processes can be observed in practical, nanophotonic cavities operating at relatively small temperatures.}
}

@article{PickCe15,
author = {A. Pick and A. Cerjan and D. Liu and A. W. Rodriguez and A. D. Stone and Y. D. Chong and Steven G. Johnson},
title = {Ab-initio multimode linewidth theory for arbitrary inhomogeneous laser cavities},
journal = {Physical Review~A},
volume = 91,
pages = 063806,
year = 2015,
eprint = {arXiv:1502.07268},
month = {June},
doi = {10.1103/PhysRevA.91.063806},
abstract = {We present a multimode laser-linewidth theory for arbitrary cavity structures and geometries that contains nearly all previously known effects and also finds new nonlinear and multimode corrections, e.g., a correction to the $\alpha$ factor due to openness of the cavity and a multimode Schawlow--Townes relation (each linewidth is proportional to a sum of inverse powers of all lasing modes). Our theory produces a quantitatively accurate formula for the linewidth, with no free parameters, including the full spatial degrees of freedom of the system. Starting with the Maxwell--Bloch equations, we handle quantum and thermal noise by introducing random currents whose correlations are given by the fluctuation--dissipation theorem. We derive coupled-mode equations for the lasing-mode amplitudes and obtain a formula for the linewidths in terms of simple integrals over the steady-state lasing modes.}
}

@article{RodriguezHui14,
author = {Alejandro W. Rodriguez and Pui-Chuen Hui and David P. Woolf and Steven G. Johnson and Marko Lon{\v{c}}ar and Federico Capasso},
title = {Classical and fluctuation-induced electromagnetic interactions in micron-scale systems: designer bonding, antibonding, and {Casimir} forces},
journal = {Annalen der Physik},
year = 2014,
volume = 527,
number = {1--2},
pages = {45--80},
month = {November},
eprint = {arXiv:1409.7348},
doi = {10.1002/andp.201400160},
abstract = {Whether intentionally introduced to exert control over particles and macroscopic objects, such as for trapping or cooling, or whether arising from the quantum and thermal fluctuations of charges in otherwise neutral bodies, leading to unwanted stiction between nearby mechanical parts, electromagnetic interactions play a fundamental role in many naturally occurring processes and technologies. In this review, we survey recent progress in the understanding and experimental observation of optomechanical and quantum-fluctuation forces. Although both of these effects arise from exchange of electromagnetic momentum, their dramatically different origins, involving either real or virtual photons, lead to different physical manifestations and design principles. Specifically, we describe recent predictions and measurements of attractive and repulsive optomechanical forces, based on the bonding and antibonding interactions of evanescent waves, as well as predictions of modified and even repulsive Casimir forces between nanostructured bodies. Finally, we discuss the potential impact and interplay of these forces in emerging experimental regimes of micromechanical devices.}
}

@article{ReidJo15,
pdf = {ReidJo15.pdf},
author = {M. T. Homer Reid and Steven G. Johnson},
title = {Efficient computation of power, force, and torque in {BEM} scattering calculations},
journal = {IEEE Transactions on Antennas and Propagation},
year = 2015,
volume = {PP},
pages = {1--11},
eprint = {arXiv:1307.2966},
month = {June},
doi = {10.1109/TAP.2015.2438393},
abstract = {We present concise, computationally efficient formulas for several quantities of interest---including absorbed and scattered power, optical force (radiation pressure), and torque---in scattering calculations performed using the boundary-element method (BEM) [also known as the method of moments (MOM)]. Our formulas compute the quantities of interest \textit{directly} from the BEM surface currents with no need ever to compute the scattered electromagnetic fields. We derive our new formulas and demonstrate their effectiveness by computing power, force, and torque in a number of example geometries. Free, open-source software implementations of our formulas are available for download online.}
}

@article{PolimeridisRe15,
author = {Athanasios G. Polimeridis and M. T. H. Reid and Weiliang Jin and Steven G. Johnson and Jacob K. White and Alejandro W. Rodriguez},
title = {Fluctuating volume-current formulation of electromagnetic fluctuations in inhomogeneous media: Incandescence and luminescence in arbitrary geometries},
journal = {Physical Review~B},
year = 2015,
volume = 92,
eprint = {arXiv:1505.05026},
pages = 134202,
month = {October},
doi = {10.1103/PhysRevB.92.134202},
abstract = {We describe a fluctuating volume-current formulation of electromagnetic fluctuations that extends our recent work on heat exchange and Casimir interactions between arbitrarily shaped homogeneous bodies [A. W. Rodriguez, M. T. H. Reid, and S. G. Johnson, Phys. Rev. B 88, 054305 (2013)] to situations involving incandescence and luminescence problems, including thermal radiation, heat transfer, Casimir forces, spontaneous emission, fluorescence, and Raman scattering, in inhomogeneous media. Unlike previous scattering formulations based on field and/or surface unknowns, our work exploits powerful techniques from the volume-integral equation (VIE) method, in which electromagnetic scattering is described in terms of volumetric, current unknowns throughout the bodies. The resulting trace formulas (boxed equations) involve products of well-studied VIE matrices and describe power and momentum transfer between objects with spatially varying material properties and fluctuation characteristics. We demonstrate that thanks to the low-rank properties of the associated matrices, these formulas are susceptible to fast-trace computations based on iterative methods, making practical calculations tractable. We apply our techniques to study thermal radiation, heat transfer, and fluorescence in complicated geometries, checking our method against established techniques best suited for homogeneous bodies as well as applying it to obtain predictions of radiation from complex bodies with spatially varying permittivities and/or temperature profiles.}
}

@article{LinJo15,
author = {Zin Lin and Steven G. Johnson and Alejandro W. Rodriguez and Marko Lon{\v{c}}ar},
title = {Design of diamond microcavities for single photon frequency down-conversion},
journal = {Optics Express},
year = 2015,
eprint = {arXiv:1504.01758},
volume = 23,
pages = {25279--25294},
month = {September},
doi = {10.1364/OE.23.025279},
abstract = {We propose monolithic diamond cavities that can be used to convert color-center Fock-state single photons from emission wavelengths to telecommunication bands. We present a detailed theoretical description of the conversion process, analyzing important practical concerns such as nonlinear phase shifts and frequency mismatch. Our analysis predicts sustainable power requirements ($< 1$ W) for a chipscale nonlinear device with high conversion efficiencies.}
}

@article{MillerJo15,
pdf = {MillerJo15.pdf},
author = {Owen D. Miller and Steven G. Johnson and Alejandro W. Rodriguez},
title = {Shape-independent limits to near-field radiative heat transfer},
journal = {Physical Review Letters},
year = 2015,
volume = 115,
pages = 204302,
eprint = {arXiv:1504.01323},
doi = {10.1103/PhysRevLett.115.204302},
month = {November},
note = {{\it Editor's Suggestion} and featured in \href{http://physics.aps.org/articles/v8/109}{APS {\it Viewpoint} article}.},
abstract = {We derive shape-independent limits to the spectral radiative heat-transfer rate between two closely spaced bodies, generalizing the concept of a blackbody to the case of near-field energy transfer. Through conservation of energy and reciprocity, we show that each body of susceptibility $\chi$ can emit and absorb radiation at enhanced rates bounded by $|\chi|^2 / \mathrm{Im} \chi$, optimally mediated by near-field photon transfer proportional to $1/d^2$ across a separation distance $d$. Dipole--dipole and dipole--plate structures approach restricted versions of the limit, but common large-area structures do not exhibit the material enhancement factor and thus fall short of the general limit. By contrast, we find that particle arrays interacting in an idealized Born approximation (i.e., neglecting multiple scattering) exhibit both enhancement factors, suggesting the possibility of orders-of-magnitude improvement beyond previous designs and the potential for radiative heat transfer to be comparable to conductive heat transfer through air at room temperature, and significantly greater at higher temperatures.}
}

@article{LuFa16,
author = {Ling Lu and Chen Fang and Liang Fu and Steven G. Johnson and John D. Joannopoulos and Marin Solja{\v{c}}i{\'{c}}},
title = {Symmetry-protected topological photonic crystal in three dimensions},
journal = {Nature Physics},
year = 2016,
month = {January},
doi = {10.1038/nphys3611},
eprint = {arXiv:1507.00337},
volume = 12,
pages = {337--340},
abstract = {Topology of electron wavefunctions was first introduced to characterize the quantum Hall states in two dimensions discovered in 1980. Over the past decade, it has been recognized that symmetry plays a crucial role in the classification of topological phases, leading to the broad notion of symmetry-protected topological phases. As a primary example, topological insulators are distinguished from normal insulators in the presence of time-reversal symmetry ($T$). A three-dimensional (3D) topological insulator exhibits an odd number of protected surface Dirac cones, a unique property that cannot be realized in any 2D systems. Importantly, the existence of topological insulators requires Kramers' degeneracy in spin–orbit coupled electronic materials; this forbids any direct analogue in boson systems. In this report, we discover a 3D topological photonic crystal phase hosting a single surface Dirac cone, which is protected by a crystal symmetry---the nonsymmorphic glide reflection rather than $T$. Such a gapless surface state is fully robust against random disorder of any type. This bosonic topological band structure is achieved by applying alternating magnetization to gap out the 3D generalized Dirac points' discovered in the bulk of our crystal. The $Z_2$ bulk invariant is characterized through the evolution of Wannier centres. Our proposal---readily realizable using ferrimagnetic materials at microwave frequencies---expands the scope of 3D topological materials from fermions to bosons.}
}

@article{CerjanPi15,
author = {Alexander Cerjan and Adi Pick and Yidong Chong and Steven G. Johnson and A. Douglas Stone},
title = {Quantitative test of general theories of the intrinsic laser linewidth},
journal = {Optics Express},
volume = 23,
pages = {28316--28340},
year = 2015,
eprint = {arXiv:1505.01884},
month = {November},
doi = {10.1364/OE.23.028316},
abstract = {We perform a first-principles calculation of the quantum-limited laser linewidth, testing the predictions of recently developed theories of the laser linewidth based on fluctuations about the known steady-state laser solutions against traditional forms of the Schawlow--Townes linewidth. The numerical study is based on finite-difference time-domain simulations of the semiclassical Maxwell--Bloch lasing equations, augmented with Langevin force terms, and thus includes the effects of dispersion, losses due to the open boundary of the laser cavity, and non-linear coupling between the amplitude and phase fluctuations ($\alpha$ factor). We find quantitative agreement between the numerical results and the predictions of the noisy steady-state ab initio laser theory (N-SALT), both in the variation of the linewidth with output power, as well as the emergence of side-peaks due to relaxation oscillations.}
}

@article{MillerPo16,
author = {Owen D. Miller and Athanasios G. Polimeridis and M. T. Homer Reid and Chia Wei Hsu and Brendan G. DeLacy and John D. Joannopoulos and Marin Solja{\v{c}}i{\'{c}} and Steven G. Johnson},
title = {Fundamental limits to the optical response in absorptive systems},
journal = {Optics Express},
volume = 24,
pages = {3329--3364},
year = 2016,
eprint = {arXiv:1503.03781},
month = {February},
doi = {10.1364/OE.24.003329},
abstract = {At visible and infrared frequencies, metals show tantalizing promise for strong subwavelength resonances, but material loss typically dampens the response. We derive fundamental limits to the optical response of absorptive systems, bounding the largest enhancements possible given intrinsic material losses. Through basic conservation-of-energy principles, we derive geometry-independent limits to per-volume absorption and scattering rates, and to local-density-of-states enhancements that represent the power radiated or expended by a dipole near a material body. We provide examples of structures that approach our absorption and scattering limits at any frequency; by contrast, we find that common antenna'' structures fall far short of our radiative LDOS bounds, suggesting the possibility for significant further improvement. Underlying the limits is a simple metric, $|\chi|^2 / \mathrm{Im} \chi$ for a material with susceptibility $\chi$, that enables broad technological evaluation of lossy media across optical frequencies.}
}

@article{LinLi16,
pdf = {LinLi16.pdf},
author = {Zin Lin and Xiangdong Liang and Marko Lon{\v{c}}ar and Steven G. Johnson and Alejandro W. Rodriguez},
title = {Cavity-enhanced second harmonic generation via nonlinear-overlap optimization},
journal = {Optica},
year = 2016,
volume = 3,
pages = {233--238},
eprint = {arXiv:1505.02880},
month = {February},
doi = {10.1364/OPTICA.3.000233},
abstract = {We describe a novel approach based on topology optimization that enables automatic discovery of wavelength-scale photonic structures for achieving high-efficiency second-harmonic generation (SHG). A key distinction from previous formulation and designs that seek to maximize Purcell factors at individual frequencies is that our method not only aims to achieve frequency matching (across an entire octave) and large radiative lifetimes, but also optimizes the equally important nonlinear--coupling figure of merit $\bar{\beta}$, involving a complicated spatial overlap-integral between modes. We apply this method to the particular problem of optimizing micropost and grating-slab cavities (one-dimensional multilayered structures) and demonstrate that a variety of material platforms can support modes with the requisite frequencies, large lifetimes $Q>10^4$, small modal volumes $\sim(\lambda/n)^3$, and extremely large $\bar{\beta}> 10^{-2}$, leading to orders of magnitude enhancements in SHG efficiency compared to state of the art photonic designs. Such giant $\bar{\beta}$ alleviate the need for ultra-narrow linewidths and thus pave the way for wavelength-scale SHG devices with faster operating timescales and higher tolerance to fabrication imperfections.}
}

@article{GeLiu16,
author = {Li Ge and David Liu and Alexander Cerjan and Stefan Rotter and Hui Cao and Steven G. Johnson and Hakan E. Tureci and A. Douglas Stone},
title = {Interaction-induced mode switching in steady-state microlasers},
journal = {Optics Express},
year = 2016,
volume = 24,
number = 1,
pages = {41--54},
month = {January},
eprint = {arXiv:1504.08018},
doi = {10.1364/OE.24.000041},
abstract = {We demonstrate that due to strong modal interactions through cross-gain saturation, the onset of a new lasing mode can switch off an existing mode via a negative power slope. In this process of interaction-induced mode switching (IMS) the two involved modes maintain their identities, i.e. they do not change their spatial field patterns or lasing frequencies. For a fixed pump profile, a simple analytic criterion for the occurrence of IMS is given in terms of their self- and cross-interaction coefficients and non-interacting thresholds, which is verified for the example of a two-dimensional microdisk laser. When the spatial pump profile is varied as the pump power is increased, IMS can be induced even when it would not occur with a fixed pump profile, as we show for two coupled laser cavities. Our findings apply to steady-state lasing and are hence different from dynamical mode switching or hopping. IMS may have potential applications in robust and flexible all-optical switching.}
}

@article{AnquillareMi15,
author = {Emma L. Anquillare and Owen D. Miller and Chia Wei Hsu and Brendan G. DeLacy and John D. Joannopoulos and Steven G. Johnson and Marin Solja{\v{c}}i{\'{c}}},
title = {Efficient, designable, and broad-bandwidth optical extinction via aspect-ratio-tailored silver nanodisks},
journal = {Optics Express},
year = 2016,
volume = 24,
pages = {10806--10816},
eprint = {arXiv:1606.00975},
month = {May},
doi = {10.1364/OE.24.010806},
abstract = {Subwavelength resonators, ranging from single atoms to metallic nanoparticles, typically exhibit a narrow-bandwidth response to optical excitations. We computationally design and experimentally synthesize tailored distributions of silver nanodisks to extinguish light over broad and varied frequency windows. We show that metallic nanodisks are 2--10$\times$ more efficient in absorbing and scattering light than common structures, and can approach fundamental limits to broadband scattering for subwavelength particles. We measure broadband extinction per volume that closely approaches theoretical predictions over three representative visible-range wavelength windows, confirming the high efficiency of nanodisks and demonstrating the collective power of computational design and experimental precision for developing new photonics technologies.}
}

@article{ZhouZh16,
author = {Hengyun Zhou and Bo Zhen and Chia Wei Hsu and Owen D. Miller and Steven G. Johnson and John D. Joannopoulos and Marin Solja{\v{c}}i{\'{c}}},
title = {Perfect single-sided radiation and absorption without mirrors},
journal = {Optica},
year = 2016,
volume = 3,
number = 10,
pages = {1079--1086},
month = {September},
doi = {10.1364/OPTICA.3.001079},
abstract = {Highly directional radiation from photonic structures is important for many applications, including high-power photonic crystal surface-emitting lasers, grating couplers, and light detection and ranging devices. However, previous dielectric, few-layer designs only achieved moderate asymmetry ratios, and a fundamental understanding of bounds on asymmetric radiation from arbitrary structures is still lacking. Here, we show that breaking the $180^\circ$ rotational symmetry of the structure is crucial for achieving highly asymmetric radiation. We develop a general temporal coupled-mode theory formalism to derive bounds on the asymmetric decay rates to the top and bottom of a photonic crystal slab for a resonance with arbitrary in-plane wavevector. Guided by this formalism, we show that infinite asymmetry is still achievable even without the need for back-reflection mirrors, and we provide numerical examples of designs that achieve asymmetry ratios exceeding $10^4$. The emission direction can also be rapidly switched from top to bottom by tuning the wavevector or frequency. Furthermore, we show that with the addition of weak material absorption loss, such structures can be used to achieve perfect absorption with single-sided illumination, even for single-pass material absorption rates less than 0.5\% and without back-reflection mirrors. Our work provides new design principles for achieving highly directional radiation and perfect absorption in photonics.}
}

@article{LiuZh16,
author = {David Liu and Bo Zhen and Li Ge and Felipe Hernandez and Adi Pick and Stephan Burkhardt and Matthias Liertzer and Stefan Rotter and Steven G. Johnson},
title = {Symmetry, stability, and computation of degenerate lasing modes},
journal = {Physical Review~A},
volume = 95,
pages = 023835,
year = 2017,
eprint = {arXiv:1611.01676},
doi = {10.1103/PhysRevA.95.023835},
month = {February},
abstract = {We present a general method to obtain the stable lasing solutions for the steady-state ab-initio lasing theory (SALT) for the case of a degenerate symmetric laser in two dimensions (2d). We find that under most regimes (with one pathological exception), the stable solutions are clockwise and counterclockwise circulating modes, generalizing previously known results of ring lasers to all 2d rotational symmetry groups. Our method uses a combination of semi-analytical solutions close to lasing threshold and numerical solvers to track the lasing modes far above threshold. Near threshold, we find closed-form expressions for both circulating modes and other types of lasing solutions as well as for their linearized Maxwell--Bloch eigenvalues, providing a simple way to determine their stability without having to do a full nonlinear numerical calculation. Above threshold, we show that a key feature of the circulating mode is its "chiral" intensity pattern, which arises from spontaneous symmetry-breaking of mirror symmetry, and whose symmetry group requires that the degeneracy persists even when nonlinear effects become important. Finally, we introduce a numerical technique to solve the degenerate SALT equations far above threshold even when spatial discretization artificially breaks the degeneracy.}
}

@article{LeeMi17,
author = {Yoonkyung E. Lee and Owen D. Miller and M. T. Homer Reid and Steven G. Johnson and Nicholas X. Fang},
title = {Computational inverse design of non-intuitive illumination patterns to maximize optical force or torque},
journal = {Optics Express},
year = 2017,
volume = 25,
pages = {6757--6766},
month = {March},
doi = {10.1364/OE.25.006757},
abstract = {This paper aims to maximize optical force or torque on arbitrary micro- and nanoscale objects using numerically optimized structured illumination. By developing a numerical framework for computer-automated design of 3d vector-field illumination, we demonstrate a 20-fold enhancement in optical torque per intensity over circularly polarized plane wave on a model plasmonic particle. The nonconvex optimization is efficiently performed by combining a compact cylindrical Bessel basis representation with a fast boundary element method and a standard derivative-free, local optimization algorithm. We analyze the optimization results for 2000 random initial configurations, discuss the tradeoff between robustness and enhancement, and compare the different effects of multipolar plasmon resonances on enhancing force or torque. All results are obtained using open-source computational software available online.}
}

@article{PickZh17,
author = {Adi Pick and Bo Zhen and Owen D. Miller and Chia W. Hsu and Felipe Hernandez and Alejandro W. Rodriguez and Marin Solja{\v{c}}i{\'{c}} and Steven G. Johnson},
title = {General theory of spontaneous emission near exceptional points},
journal = {Optics Express},
year = 2017,
volume = 25,
pages = {12325--12348},
eprint = {arXiv:1604.06478},
month = {May},
doi = {10.1364/OE.25.012325},
note = {Selected as Editor's Pick article.},
abstract = {We present a general theory of spontaneous emission at exceptional points (EPs)—exotic degeneracies in non-Hermitian systems. Our theory extends beyond spontaneous emission to any light–matter interaction described by the local density of states (e.g., absorption, thermal emission, and nonlinear frequency conversion). Whereas traditional spontaneous-emission theories imply infinite enhancement factors at EPs, we derive finite bounds on the enhancement, proving maximum enhancement of 4 in passive systems with second-order EPs and significantly larger enhancements (exceeding 400x) in gain-aided and higher-order EP systems. In contrast to non-degenerate resonances, which are typically associated with Lorentzian emission curves in systems with low losses, EPs are associated with non-Lorentzian lineshapes, leading to enhancements that scale nonlinearly with the resonance quality factor. Our theory can be applied to dispersive media, with proper normalization of the resonant modes.}
}

@article{MillerIl17,
pdf = {MillerIl17.pdf},
author = {Owen D. Miller and Ognjen Ilic and Thomas Christensen and M. T. Homer Reid and Harry A. Atwater and John D. Joannopoulos and Marin Solja{\v{c}}i{\'{c}} and Steven G. Johnson},
title = {Limits to the optical response of graphene and two-dimensional materials},
journal = {Nano Letters},
year = 2017,
eprint = {arXiv:1705.03582},
month = {August},
doi = {10.1021/acs.nanolett.7b02007},
abstract = {Two-dimensional (2D) materials provide a platform for strong light--matter interactions, creating wide-ranging design opportunities via new-material discoveries and new methods for geometrical structuring. We derive general upper bounds to the strength of such light--matter interactions, given only the optical conductivity of the material, including spatial nonlocality, and otherwise independent of shape and configuration. Our material figure-of-merit shows that highly doped graphene is an optimal material at infrared frequencies, whereas single-atomic-layer silver is optimal in the visible. For quantities ranging from absorption and scattering to near-field spontaneous-emission enhancements and radiative heat transfer, we consider canonical geometrical structures and show that in certain cases the bounds can be approached, while in others there may be significant opportunity for design improvement. The bounds can encourage systematic improvements in the design of ultrathin broadband absorbers, 2D antennas, and near-field energy harvesters.}
}

@article{LambertFi10,
author = {Emmanuel Lambert and  Martin Fiers and  Shavkat Nizamov and  Martijn Tassaert and  Steven G. Johnson and  Peter Bienstman and Wim Bogaerts},
title = {{Python} bindings for the open source electromagnetic simulator {Meep}},
journal = {Computing in Science and Engineering},
year = 2010,
volume = 13,
number = 3,
pages = {53--65},
month = {July},
doi = {10.1109/MCSE.2010.98},
abstract = {Meep is a broadly used open source package for finite-difference time-domain electromagnetic simulations. Python bindings for Meep make it easier to use for researchers and open promising opportunities for integration with other packages in the Python ecosystem. As this project shows, implementing Python-Meep offers benefits for specific disciplines and for the wider research community.}
}

@article{LiuJo18,
author = {Boyuan Liu and John D. Joannopoulos and Steven G. Johnson and Ling Lu},
title = {Generalized {G}ilat-{R}aubenheimer method for density-of-states calculation in photonic crystals},
journal = {Journal of Optics},
year = 2018,
eprint = {arXiv:1711.07993},
doi = {10.1088/2040-8986/aaae52},
month = {February},
note = {Published online before print.},
abstract = {Efficient numeric algorithm is the key for accurate evaluation of density of states (DOS) in band theory. Gilat-Raubenheimer (GR) method proposed in 1966 is an efficient linear extrapolation method which was limited in specific lattices. Here, using an affine transformation, we provide a new generalization of the original GR method to any Bravais lattices and show that it is superior to the tetrahedron method and the adaptive Gaussian broadening method. Finally, we apply our generalized GR (GGR) method to compute DOS of various gyroid photonic crystals of topological degeneracies.}
}


This file was generated by bibtex2html 1.90.